RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	NPNT	Q6UXI9	565 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	PARS2	Q7L3T8	475 aa	Known RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	DAAM2	Q86T65	1068 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	RHOT1	Q8IXI2	618 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	ATPAF2	Q8N5M1	289 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	TSEN2	Q8NCE0	465 aa	Known RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	KRT35	Q92764	455 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	ISG20	Q96AZ6	181 aa	Known RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	BIRC7	Q96CA5	298 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	SGK2	Q9HBY8	427 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	FZD4	Q9ULV1	537 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	PCDHGA5	Q9Y5G8	931 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	SCN8A	Q9UQD0	1980 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	LRP4	O75096	1905 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	CABIN1	Q9Y6J0	2220 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	METTL12	A8MUP2	240 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	PJA2	O43164	708 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	PALM	O75781	387 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	PRNP	P04156	253 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	IGHV4-34	P06331	123 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	TAS2R38	P59533	333 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	DYNLT1	P63172	113 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	IL10RB	Q08334	325 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	SLC10A7	Q0GE19	358 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	KIAA0895L	Q68EN5	471 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	C11orf63	Q6NUN7	778 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	MFSD7	Q6UXD7	560 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	B4GALNT4	Q76KP1	1039 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	RFX6	Q8HWS3	928 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	SYT12	Q8IV01	421 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	LZTR1	Q8N653	840 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	TMIE	Q8NEW7	156 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	KLK6	Q92876	244 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	FAF2	Q96CS3	445 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	GDAP1L1	Q96MZ0	367 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	KLHL32	Q96NJ5	620 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	RNF157	Q96PX1	679 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	CINP	Q9BW66	212 aa	Predicted RBP	18.85	■□□□□ 0.61
C4A-256	ENST00000490663	VPS45	Q9NRW7	570 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	DONSON	Q9NYP3	566 aa		18.85	■□□□□ 0.61
C4A-256	ENST00000490663	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.85	■□□□□ 0.61
C4A-256	ENST00000490663	GRID2IP	A4D2P6	1211 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	MAFK	O60675	156 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	ZNF806	P0C7X5	589 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	MAT2A	P31153	395 aa	Known RBP	18.84	■□□□□ 0.61
C4A-256	ENST00000490663	SERPINB6	P35237	376 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	SLC1A1	P43005	524 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	IRX4	P78413	519 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	SLC10A2	Q12908	348 aa	Predicted RBP	18.84	■□□□□ 0.61
C4A-256	ENST00000490663	PAFAH1B3	Q15102	231 aa	Known RBP	18.84	■□□□□ 0.61
C4A-256	ENST00000490663	MYLK3	Q32MK0	819 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	AASDH	Q4L235	1098 aa	Predicted RBP	18.84	■□□□□ 0.61
C4A-256	ENST00000490663	TRIM61	Q5EBN2	209 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	MAP7D3	Q8IWC1	876 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	C12orf50	Q8NA57	414 aa	Predicted RBP	18.84	■□□□□ 0.61
C4A-256	ENST00000490663	OR2I1P	Q8NGU4	316 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	FOXJ1	Q92949	421 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	NSMCE3	Q96MG7	304 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	EBF2	Q9HAK2	575 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	DYRK4	Q9NR20	520 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	GGT7	Q9UJ14	662 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	ITM2B	Q9Y287	266 aa		18.84	■□□□□ 0.61
C4A-256	ENST00000490663	TBC1D3D	A0A087WVF3	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3I	A0A087WXS9	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3E	A0A087X179	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3K	A0A087X1G2	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3L	B9A6J9	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	PLRG1	O43660	514 aa	Known RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	LRP3	O75074	770 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	PEX11B	O96011	259 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3H	P0C7X1	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	KRT10	P13645	584 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	ABL2	P42684	1182 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	MAX	P61244	160 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	LBR	Q14739	615 aa	Known RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	INO80D	Q53TQ3	878 aa	Predicted RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	ODF2	Q5BJF6	829 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	SPDYC	Q5MJ68	293 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	SYCP2L	Q5T4T6	812 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	KAZN	Q674X7	775 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3G	Q6DHY5	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3C	Q6IPX1	549 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	PGBD5	Q8N414	524 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	PLD5	Q8N7P1	536 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	CADM4	Q8NFZ8	388 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	OR2T34	Q8NGX1	318 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	CASKIN2	Q8WXE0	1202 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	MYOC	Q99972	504 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.83	■□□□□ 0.6
C4A-256	ENST00000490663	HEY1	Q9Y5J3	304 aa		18.83	■□□□□ 0.6
C4A-256	ENST00000490663	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	LNP1	A1A4G5	178 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	LRRC72	A6NJI9	287 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	PSTPIP1	O43586	416 aa		18.82	■□□□□ 0.6
C4A-256	ENST00000490663	POP4	O95707	220 aa	Known RBP	18.82	■□□□□ 0.6
C4A-256	ENST00000490663	ITIH2	P19823	946 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms