RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ELP4Q96EB1 424 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 RNF125Q96EQ8 232 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 SEC62Q99442 399 aaKnown RBP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 CLSTN3Q9BQT9 956 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 SF3B5Q9BWJ5 86 aaKnown RBP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 KLHL31Q9H511 634 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 WDR6Q9NNW5 1121 aaKnown RBP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 HIF1ANQ9NWT6 349 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 HCN3Q9P1Z3 774 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 BCCIPQ9P287 314 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 SRPRBQ9Y5M8 271 aaKnown RBP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 MS4A18H0YCH9 400 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 OAZ2O95190 189 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 SLC2A4P14672 509 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ARSBP15848 533 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 SELENOVP59797 346 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZP1P60852 638 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 EFNB1P98172 346 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 LEXMQ3ZCV2 418 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZNF766Q5HY98 468 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 AWAT2Q6E213 333 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 MOB3CQ70IA8 216 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZMIZ2Q8NF64 920 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ENGASEQ8NFI3 743 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 OR4N2Q8NGD1 307 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 ST8SIA4Q92187 359 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 TTYH1Q9H313 450 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 SPATS2LQ9NUQ6 558 aaKnown RBP5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 PPP1R14DQ9NXH3 145 aa5.16□□□□□ -1.58
HMGB1P38-201ENST00000490557 PABPN1LA6NDY0 278 aaKnown RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 A6NLC8 198 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 LIASO43766 372 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 CLDN7O95471 211 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FGF2P09038 288 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TFPIP10646 304 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 PCNAP12004 261 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZNF8P17098 575 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 LIFRP42702 1097 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 PKP1Q13835 747 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 VEPH1Q14D04 833 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 DNTTIP2Q5QJE6 756 aaKnown RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 UBAP2Q5T6F2 1119 aaKnown RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FAM69AQ5T7M9 428 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 CES5AQ6NT32 575 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZNF549Q6P9A3 640 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FAM83HQ6ZRV2 1179 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TECPR1Q7Z6L1 1165 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TADA2BQ86TJ2 420 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FAM160B2Q86V87 743 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 NAXEQ8NCW5 288 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM18Q96B42 140 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZBTB9Q96C00 473 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZBTB10Q96DT7 871 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 MPHOSPH8Q99549 860 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 NAP1L4Q99733 375 aaKnown RBP5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FUZQ9BT04 418 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 UBN1Q9NPG3 1134 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 PGAP2Q9UHJ9 254 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 FZD10Q9ULW2 581 aa5.15□□□□□ -1.59
HMGB1P38-201ENST00000490557 TEX13CA0A0J9YWL9 993 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 A0A1B0GVC2 190 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 KDM4EB2RXH2 506 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 VWA5AO00534 786 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 ATP2C2O75185 946 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 CTPS1P17812 591 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 FMO4P31512 558 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 PGGT1BP53609 377 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 HDAC4P56524 1084 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 ROR2Q01974 943 aaKnown RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 SLC18A2Q05940 514 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 FOXD4Q12950 439 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 CAPSQ13938 189 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 TAF11Q15544 211 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 BAK1Q16611 211 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 DUSP6Q16828 381 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 ODF3L2Q3SX64 289 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 FSCBQ5H9T9 825 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 JAKMIP3Q5VZ66 844 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 ATG9BQ674R7 924 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMED8Q6PL24 325 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 C17orf99Q6UX52 265 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 GPAT4Q86UL3 456 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 DENND6AQ8IWF6 608 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 C11orf65Q8NCR3 313 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 TMEM170AQ8WVE7 144 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 ZC3HAV1LQ96H79 300 aaKnown RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 APOLD1Q96LR9 279 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 CDT1Q9H211 546 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 MRPL44Q9H9J2 332 aaKnown RBP5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 PLAC1Q9HBJ0 212 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 SNTG1Q9NSN8 517 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 INSL5Q9Y5Q6 135 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 TNFRSF18Q9Y5U5 241 aa5.14□□□□□ -1.59
HMGB1P38-201ENST00000490557 TTC36A6NLP5 189 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 ITM2AO43736 263 aa5.13□□□□□ -1.59
HMGB1P38-201ENST00000490557 MTA2O94776 668 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms