RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SNRNP70P08621 437 aaKnown RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 CKMT1AP12532 417 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 DAOP14920 347 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 C21orf33P30042 268 aaPredicted RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 RBM5P52756 815 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 IL13RA2Q14627 380 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 PWP2Q15269 919 aaKnown RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 ZNF484Q5JVG2 852 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 WBP2NLQ6ICG8 309 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 JMJD6Q6NYC1 403 aaPredicted RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 GJB7Q6PEY0 223 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 GALNT15Q8N3T1 639 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 MCPH1Q8NEM0 835 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 GPT2Q8TD30 523 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 POF1BQ8WVV4 589 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 CXorf56Q9H5V9 222 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 MVB12BQ9H7P6 319 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 CLK4Q9HAZ1 481 aaKnown RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 WDR6Q9NNW5 1121 aaKnown RBP3.99□□□□□ -1.77
HMGN1-218ENST00000490032 ATP8A2Q9NTI2 1148 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 OCIAD1Q9NX40 245 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 NLKQ9UBE8 527 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 HDAC6Q9UBN7 1215 aa3.99□□□□□ -1.77
HMGN1-218ENST00000490032 WDR81Q562E7 1941 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 F5H423 210 aaPredicted RBP3.98□□□□□ -1.77
HMGN1-218ENST00000490032 CHL1O00533 1208 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 KRT36O76013 467 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 KRT38O76015 456 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 CBX6O95503 412 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 TNNT1P13805 278 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 DLX5P56178 289 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 FAM27E3Q08E93 113 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 ST3GAL1Q11201 340 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 ILF3Q12906 894 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGN1-218ENST00000490032 UBE4AQ14139 1066 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 AP5B1Q2VPB7 878 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 ZNF672Q499Z4 452 aaPredicted RBP3.98□□□□□ -1.77
HMGN1-218ENST00000490032 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 GSG1LQ6UXU4 331 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 ZMIZ2Q8NF64 920 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 LILRB1Q8NHL6 650 aaPredicted RBP3.98□□□□□ -1.77
HMGN1-218ENST00000490032 CSGALNACT1Q8TDX6 532 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 THAP4Q8WY91 577 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 GOLGA1Q92805 767 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 ATOH1Q92858 354 aaPredicted RBP3.98□□□□□ -1.77
HMGN1-218ENST00000490032 MASTLQ96GX5 879 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 GAREM1Q9H706 876 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 SAYSD1Q9NPB0 183 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 CD207Q9UJ71 328 aa3.98□□□□□ -1.77
HMGN1-218ENST00000490032 DYTNA2CJ06 578 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 KDM4EB2RXH2 506 aaPredicted RBP3.97□□□□□ -1.77
HMGN1-218ENST00000490032 CAMTA2O94983 1202 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 CTPS1P17812 591 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 PTPN9P43378 593 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 CENPAP49450 140 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 SLC18A2Q05940 514 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 CUL4BQ13620 913 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 MORC3Q14149 939 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 SLC39A14Q15043 492 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 ZRSR1Q15695 479 aaKnown RBP3.97□□□□□ -1.77
HMGN1-218ENST00000490032 ZNF718Q3SXZ3 478 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 ZNF329Q86UD4 541 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 RFLNBQ8N5W9 214 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 LINS1Q8NG48 757 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 TBC1D22AQ8WUA7 517 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 IGSF21Q96ID5 467 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 PKP4Q99569 1192 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 TLR8Q9NR97 1041 aaKnown RBP3.97□□□□□ -1.77
HMGN1-218ENST00000490032 DAAM1Q9Y4D1 1078 aa3.97□□□□□ -1.77
HMGN1-218ENST00000490032 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 HBP1O60381 514 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 SERPINC1P01008 464 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 IL1AP01583 271 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TK1P04183 234 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 MYF6P23409 242 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 ADD2P35612 726 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 LPIN1Q14693 890 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 KRT72Q14CN4 511 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 ME3Q16798 604 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TIGD6Q17RP2 521 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 DCAF6Q58WW2 860 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 CBWD5Q5RIA9 395 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 SH2D4BQ5SQS7 431 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 ZNF114Q8NC26 417 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 LTV1Q96GA3 475 aaPredicted RBP3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TXNDC15Q96J42 360 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 ADGRG7Q96K78 797 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 NPLQ9BXD5 320 aaPredicted RBP3.96□□□□□ -1.78
HMGN1-218ENST00000490032 CTDSP1Q9GZU7 261 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 RETREG1Q9H6L5 497 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 CHODLQ9H9P2 273 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TMEM51Q9NW97 253 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TAGLN3Q9UI15 199 aa3.96□□□□□ -1.78
HMGN1-218ENST00000490032 TIMM23O14925 209 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 FMO4P31512 558 aa3.95□□□□□ -1.78
HMGN1-218ENST00000490032 HNF1BP35680 557 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms