RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 PPP1R12AO14974 1030 aaPredicted RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 IGSF6O95976 241 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 GSRP00390 522 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 FGGP02679 453 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 UGT2B4P06133 528 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 RBP3P10745 1247 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 ITIH2P19823 946 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 RBL1P28749 1068 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SLC8A1P32418 973 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 NR2C2P49116 596 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SCNN1BP51168 640 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 TPMTP51580 245 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SNRPD1P62314 119 aaKnown RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 DSC2Q02487 901 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 ITKQ08881 620 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 NIPAL4Q0D2K0 466 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 WASHC5Q12768 1159 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SNX1Q13596 522 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 HNRNPDQ14103 355 aaKnown RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 RFTN1Q14699 578 aaPredicted RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 E2F5Q15329 346 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 LONRF2Q1L5Z9 754 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 MYLK3Q32MK0 819 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 LRRC73Q5JTD7 316 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SRLQ86TD4 932 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 PRUNE1Q86TP1 453 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 WDR5BQ86VZ2 330 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 LONP2Q86WA8 852 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 CAMK1DQ8IU85 385 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 LRRC49Q8IUZ0 686 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 HDDC3Q8N4P3 179 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 TEX26Q8N6G2 289 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 GANCQ8TET4 914 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 NSMCE1Q8WV22 266 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 TFB1MQ8WVM0 346 aaKnown RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 CASKIN2Q8WXE0 1202 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 NELL1Q92832 810 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 ISG20Q96AZ6 181 aaKnown RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 GDAP1L1Q96MZ0 367 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 KLHL32Q96NJ5 620 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 ZNF599Q96NL3 588 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 AGAP3Q96P47 875 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 QKIQ96PU8 341 aaKnown RBP eCLIP8.4□□□□□ -1.06
SF1-218ENST00000489544 PSKH2Q96QS6 385 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 OSBPL9Q96SU4 736 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 HEPHQ9BQS7 1158 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 PABPC3Q9H361 631 aaKnown RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 NOD2Q9HC29 1040 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 FBXL12Q9NXK8 326 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 IL36AQ9UHA7 158 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 MBD1Q9UIS9 605 aaPredicted RBP8.4□□□□□ -1.06
SF1-218ENST00000489544 DNPEPQ9ULA0 475 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SNX12Q9UMY4 172 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 ZKSCAN5Q9Y2L8 839 aa8.4□□□□□ -1.06
SF1-218ENST00000489544 SHROOM3Q8TF72 1996 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 CXorf51AA0A1B0GTR3 108 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ZBTB24O43167 697 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 RNASEH1O60930 286 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 RNASEH2AO75792 299 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 DNTTP04053 509 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 PRKCGP05129 697 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ACADMP11310 421 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 CR2P20023 1033 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 PTPN3P26045 913 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 HOXA6P31267 233 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ACSL1P33121 698 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 DRD3P35462 400 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 P2RY2P41231 377 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 RENBPP51606 427 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 GDF10P55107 478 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 IFI35P80217 286 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 SEMG2Q02383 582 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 CNTN1Q12860 1018 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 PTPRRQ15256 657 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 LPAL2Q16609 132 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 HS1BP3Q53T59 392 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 SLC45A4Q5BKX6 768 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 TIGD7Q6NT04 549 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 DARS2Q6PI48 645 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 NCEH1Q6PIU2 408 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 SYT10Q6XYQ8 523 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ZSWIM9Q86XI8 627 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 TAB3Q8N5C8 712 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 ZBTB44Q8NCP5 570 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 SLC35B2Q8TB61 432 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 ARRDC2Q8TBH0 407 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 HTR3CQ8WXA8 447 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 TOE1Q96GM8 510 aaKnown RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 CAPZA3Q96KX2 299 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 CCDC114Q96M63 670 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 SMIM14Q96QK8 99 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 IL12RB2Q99665 862 aa8.39□□□□□ -1.07
SF1-218ENST00000489544 NAPGQ99747 312 aaPredicted RBP8.39□□□□□ -1.07
SF1-218ENST00000489544 SEMA3CQ99985 751 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms