RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 K7EM74 188 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 NKX2-8O15522 239 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 CLDN1O95832 211 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 CCL4P13236 92 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 LCP1P13796 627 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 NR1D1P20393 614 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 CHRNA3P32297 505 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 PLK1P53350 603 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 SLC8A3P57103 927 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 SULT2A1Q06520 285 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 TCEA2Q15560 299 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 RAP1GAP2Q684P5 730 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 ERN2Q76MJ5 926 aaKnown RBP9.38□□□□□ -0.91
SSBP1-212ENST00000489378 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-212ENST00000489378 MAMDC2Q7Z304 686 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-212ENST00000489378 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 ARL10Q8N8L6 244 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 Q8N9G6 341 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-212ENST00000489378 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 UBA3Q8TBC4 463 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 BTN2A2Q8WVV5 523 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 BACH2Q9BYV9 841 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 DMAC2Q9NW81 257 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 CGNQ9P2M7 1197 aaKnown RBP9.38□□□□□ -0.91
SSBP1-212ENST00000489378 TP53TG5Q9Y2B4 290 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 NF1P21359 2839 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 SHANK1Q9Y566 2161 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CELSR1Q9NYQ6 3014 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 PIK3R2O00459 728 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 FPGTO14772 594 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SPTLC2O15270 562 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 DUX1O43812 170 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 VPS4BO75351 444 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 PRKAR1AP10644 381 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 TACR2P21452 398 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 ITGB7P26010 798 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 PFN3P60673 137 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 RPS21P63220 83 aaKnown RBP9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 C16orf72Q14CZ0 275 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 KNOP1Q1ED39 458 aaKnown RBP9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CXorf57Q6NSI4 855 aaKnown RBP9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CCNJLQ8IV13 435 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CCAR2Q8N163 923 aaKnown RBP9.37□□□□□ -0.91
SSBP1-212ENST00000489378 IL22RA1Q8N6P7 574 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CHST14Q8NCH0 376 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 OR52K2Q8NGK3 314 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 OR2A12Q8NGT7 310 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 TMEM159Q96B96 161 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 ALG14Q96F25 216 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CATSPER2Q96P56 530 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CMKLR1Q99788 373 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 IMPG2Q9BZV3 1241 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 DNAI2Q9GZS0 605 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 TNMDQ9H2S6 317 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 CISHQ9NSE2 258 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 KBTBD4Q9NVX7 518 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 SLC25A13Q9UJS0 675 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 TSPAN16Q9UKR8 245 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 VPS4AQ9UN37 437 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 NAALADL1Q9UQQ1 740 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 RNF215Q9Y6U7 377 aa9.37□□□□□ -0.91
SSBP1-212ENST00000489378 PRRC2CQ9Y520 2896 aaKnown RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 WIPF3A6NGB9 483 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 ZNF891A8MT65 544 aaPredicted RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 IKBKBO14920 756 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 MT-CO1P00395 513 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 GRNP28799 593 aaKnown RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CASP1P29466 404 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 GCLMP48507 274 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 RGS7P49802 495 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 PPP3CAQ08209 521 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 BST2Q10589 180 aaKnown RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 PHF19Q5T6S3 580 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 FAXCQ5TGI0 409 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 TMEM164Q5U3C3 297 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 C1QL3Q5VWW1 255 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 KIAA1161Q6NSJ0 714 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CHSY1Q86X52 802 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 SCML4Q8N228 414 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 SH2D3CQ8N5H7 860 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 TMIEQ8NEW7 156 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 GRIN3AQ8TCU5 1115 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CLEC4CQ8WTT0 213 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 TBATAQ96M53 351 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 SLC13A1Q9BZW2 595 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 SEMA6CQ9H3T2 930 aa9.36□□□□□ -0.91
SSBP1-212ENST00000489378 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms