RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
HDAC6-233ENST00000489352 ERV3-1Q14264 604 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 NR6A1Q15406 480 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 RAB41Q5JT25 222 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 MACC1Q6ZN28 852 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 LGI2Q8N0V4 545 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 TAF4BQ92750 862 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 TWNKQ96RR1 684 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 HDAC8Q9BY41 377 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 FGFBP2Q9BYJ0 223 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 NUCKS1Q9H1E3 243 aaKnown RBP11.76□□□□□ -0.53
HDAC6-233ENST00000489352 LATS2Q9NRM7 1088 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 KCND3Q9UK17 655 aa11.76□□□□□ -0.53
HDAC6-233ENST00000489352 IGLON5A6NGN9 336 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CLIC2O15247 247 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 MOCS2O96007 188 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-233ENST00000489352 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CTSLP07711 333 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 ALDH4A1P30038 563 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 EIF4A3P38919 411 aaKnown RBP11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CASP4P49662 377 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 HK3P52790 923 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 RNASE9P60153 205 aaKnown RBP11.75□□□□□ -0.53
HDAC6-233ENST00000489352 BIRC2Q13490 618 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 EDRF1Q3B7T1 1238 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 ZNF394Q53GI3 561 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CERCAMQ5T4B2 595 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 SPNS3Q6ZMD2 512 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CCDC65Q8IXS2 484 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 DENND6BQ8NEG7 585 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 KCTD13Q8WZ19 329 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 MYEOVQ96EZ4 313 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
HDAC6-233ENST00000489352 IMPG2Q9BZV3 1241 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 CROCCQ5TZA2 2017 aa11.75□□□□□ -0.53
HDAC6-233ENST00000489352 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 SORBS2O94875 1100 aaKnown RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 RASGRP1O95267 797 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 IGLV3-27P01718 113 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 PDGFAP04085 211 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 ADRB3P13945 408 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 HOXB4P17483 251 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 ASPAP45381 313 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 PMS2P54278 862 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 INCA1Q0VD86 236 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 PRR30Q53SZ7 412 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 RRAGBQ5VZM2 374 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 ANKS6Q68DC2 871 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 SH2D3CQ8N5H7 860 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 ATP11CQ8NB49 1132 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 GPR156Q8NFN8 814 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 GRIN3AQ8TCU5 1115 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 TSACCQ96A04 125 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 KLF6Q99612 283 aaPredicted RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 REPIN1Q9BWE0 567 aaKnown RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 C1QTNF7Q9BXJ2 289 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 MRPL40Q9NQ50 206 aaKnown RBP11.74□□□□□ -0.53
HDAC6-233ENST00000489352 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 IL36AQ9UHA7 158 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 DCHS2Q6V1P9 2916 aa11.74□□□□□ -0.53
HDAC6-233ENST00000489352 A6NCN8 305 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 ANKUB1A6NFN9 424 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 YJEFN3A6XGL0 299 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 RHPN2P1A8MT19 583 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 E7ENQ6 273 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 TOR1BO14657 336 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 NUDT21O43809 227 aaKnown RBP11.73□□□□□ -0.53
HDAC6-233ENST00000489352 EXOC3O60645 756 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 VNN1O95497 513 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 HTR1BP28222 390 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-233ENST00000489352 PLK1P53350 603 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 ADIGQ0VDE8 80 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 C14orf28Q4W4Y0 310 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 TAF8Q7Z7C8 310 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 VPS36Q86VN1 386 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 ARHGEF17Q96PE2 2063 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-233ENST00000489352 NUDT22Q9BRQ3 303 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 SLC25A23Q9BV35 468 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 C1QTNF2Q9BXJ5 285 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 DPEP2Q9H4A9 486 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 CYP3A43Q9HB55 503 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 LUZP4Q9P127 313 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 VPS28Q9UK41 221 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 PNMA8BQ9ULN7 279 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-233ENST00000489352 FADS3Q9Y5Q0 445 aa11.73□□□□□ -0.53
HDAC6-233ENST00000489352 MRPS18BQ9Y676 258 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms