RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GP1BAP07359 652 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 NME1P15531 152 aaKnown RBP18.74■□□□□ 0.59
HDAC6-231ENST00000488905 EEF1GP26641 437 aaKnown RBP18.74■□□□□ 0.59
HDAC6-231ENST00000488905 RABIFP47224 123 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 MAPKAPK2P49137 400 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 FZD2Q14332 565 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 C15orf59Q2T9L4 293 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-231ENST00000488905 ARL13BQ3SXY8 428 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 TCP11X2Q5H9J9 407 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 NLRP14Q86W24 1093 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 FAM181AQ8N9Y4 354 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 OR6K2Q8NGY2 324 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 DEPDC7Q96QD5 511 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 GANQ9H2C0 597 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 USP29Q9HBJ7 922 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 EVA1BQ9NVM1 165 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 HECAQ9UBI9 543 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-231ENST00000488905 OR12D3Q9UGF7 316 aa18.74■□□□□ 0.59
HDAC6-231ENST00000488905 ANKRD36A6QL64 1941 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 LRP4O75096 1905 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 K7ESM1 405 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 GFPT2O94808 682 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 CSF2P04141 144 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 CYP1A1P04798 512 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-231ENST00000488905 MYF5P13349 255 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RHOQP17081 205 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 MMP8P22894 467 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 SDC4P31431 198 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 ADRA1BP35368 520 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 ABL2P42684 1182 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 GEMIN4P57678 1058 aaKnown RBP18.73■□□□□ 0.59
HDAC6-231ENST00000488905 FMO1Q01740 532 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 CDR2Q01850 454 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RWDD4Q6NW29 188 aaKnown RBP18.73■□□□□ 0.59
HDAC6-231ENST00000488905 PLPP6Q8IY26 295 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RYBPQ8N488 228 aaPredicted RBP18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RXFP2Q8WXD0 754 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 ARHGEF2Q92974 986 aaKnown RBP18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RAB7BQ96AH8 199 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 NUP62CLQ9H1M0 184 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RETREG1Q9H6L5 497 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 TMEM248Q9NWD8 314 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 TAB2Q9NYJ8 693 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 DNAI1Q9UI46 699 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 GGT7Q9UJ14 662 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 ITM2BQ9Y287 266 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 RAI2Q9Y5P3 530 aa18.73■□□□□ 0.59
HDAC6-231ENST00000488905 C2CD4BA6NLJ0 364 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 C16orf96A6NNT2 1141 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 FPGTO14772 594 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 TSPAN6O43657 245 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 GSRP00390 522 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 GKP32189 559 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 DUSP3P51452 185 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 TLE3Q04726 772 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 CCDC173Q0VFZ6 552 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 SGCGQ13326 291 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 PDE1CQ14123 709 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 POLD3Q15054 466 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 CCDC14Q49A88 953 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 ZNF805Q5CZA5 627 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 ZCCHC8Q6NZY4 707 aaKnown RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 DENND6BQ8NEG7 585 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 OR2AP1Q8NGE2 309 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 JOSD2Q8TAC2 188 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 TBC1D31Q96DN5 1066 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 LENG8Q96PV6 779 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 KLF6Q99612 283 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-231ENST00000488905 C11orf70Q9BRQ4 267 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 C1QTNF2Q9BXJ5 285 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 OSBPL2Q9H1P3 480 aa18.72■□□□□ 0.59
HDAC6-231ENST00000488905 IGLON5A6NGN9 336 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 FAM72CH0Y354 149 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 KRIT1O00522 736 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 NEMP1O14524 444 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 SPINT1O43278 529 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 RAMP2O60895 175 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 LRIG2O94898 1065 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 UGT2B4P06133 528 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 PTPN9P43378 593 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 SNRPD1P62314 119 aaKnown RBP18.71■□□□□ 0.59
HDAC6-231ENST00000488905 GABREP78334 506 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 TPRG1LQ5T0D9 272 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 FAM72AQ5TYM5 149 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 FAM72DQ6L9T8 149 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 STRADAQ7RTN6 431 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 FAM72BQ86X60 149 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 SPACA3Q8IXA5 215 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 IFI44Q8TCB0 444 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 GPT2Q8TD30 523 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 VOPP1Q96AW1 172 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 ARHGEF26Q96DR7 871 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 LGMNQ99538 433 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 OSBPL1AQ9BXW6 950 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 MAGEH1Q9H213 219 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 IPO11Q9UI26 975 aaKnown RBP18.71■□□□□ 0.59
HDAC6-231ENST00000488905 HPCAL4Q9UM19 191 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 CSNK1G3Q9Y6M4 447 aa18.71■□□□□ 0.59
HDAC6-231ENST00000488905 ATXN7O15265 892 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-231ENST00000488905 AQP9O43315 295 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms