RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 OASLQ15646 514 aaKnown RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 SLC9A4Q6AI14 798 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 DCAF4L2Q8NA75 395 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 USP33Q8TEY7 942 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 SPON2Q9BUD6 331 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 ACE2Q9BYF1 805 aaPredicted RBP19.71■□□□□ 0.75
CCM2-216ENST00000488727 ATP13A1Q9HD20 1204 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 DLGAP2Q9P1A6 1054 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 VPS51Q9UID3 782 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 DNPEPQ9ULA0 475 aa19.71■□□□□ 0.75
CCM2-216ENST00000488727 ZDBF2Q9HCK1 2354 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 TIMM44O43615 452 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 TCEA3O75764 348 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 ZMPSTE24O75844 475 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 ITGAVP06756 1048 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 DLDP09622 509 aaKnown RBP19.7■□□□□ 0.74
CCM2-216ENST00000488727 PAFAH1B3Q15102 231 aaKnown RBP19.7■□□□□ 0.74
CCM2-216ENST00000488727 PARP15Q460N3 678 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 KAZNQ674X7 775 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 IL31Q6EBC2 164 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 B4GALNT4Q76KP1 1039 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 BMP8AQ7Z5Y6 402 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 RFX6Q8HWS3 928 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 SYNPOQ8N3V7 929 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 LZTR1Q8N653 840 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 ZNF513Q8N8E2 541 aaPredicted RBP19.7■□□□□ 0.74
CCM2-216ENST00000488727 IL17RCQ8NAC3 791 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 RPLP0P6Q8NHW5 317 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 EPS8L3Q8TE67 593 aaKnown RBP19.7■□□□□ 0.74
CCM2-216ENST00000488727 ZNF473Q8WTR7 871 aaKnown RBP19.7■□□□□ 0.74
CCM2-216ENST00000488727 MYO19Q96H55 970 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 SERPINB12Q96P63 405 aa19.7■□□□□ 0.74
CCM2-216ENST00000488727 CBX4O00257 560 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 DNALI1O14645 258 aaPredicted RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 NCAM2O15394 837 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 MAP3K6O95382 1288 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 ATP5BP06576 529 aaKnown RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 HNRNPLP14866 589 aaKnown RBP eCLIP19.69■□□□□ 0.741e-7■□□□□ 10.3
CCM2-216ENST00000488727 ETFBP38117 255 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 RPS9P46781 194 aaKnown RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 DYNLT1P63172 113 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 ECT2LQ008S8 904 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 GBE1Q04446 702 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 SERINC3Q13530 473 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 ZNF234Q14588 700 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 GSTA5Q7RTV2 222 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 ZCCHC9Q8N567 271 aaKnown RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 CCDC33Q8N5R6 958 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 SLC35B2Q8TB61 432 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 UCMAQ8WVF2 138 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 RPL10LQ96L21 214 aaKnown RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 MRGPRX3Q96LB0 322 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 C2orf49Q9BVC5 232 aaPredicted RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 CHRDQ9H2X0 955 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 THAP10Q9P2Z0 257 aaPredicted RBP19.69■□□□□ 0.74
CCM2-216ENST00000488727 ERVW-1Q9UQF0 538 aa19.69■□□□□ 0.74
CCM2-216ENST00000488727 SERPINB6P35237 376 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 STK19P49842 368 aaPredicted RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 PAPOLAP51003 745 aaKnown RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 CLCN5P51795 746 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ARF5P84085 180 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 SLC10A2Q12908 348 aaPredicted RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 LINGO4Q6UY18 593 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ARHGAP36Q6ZRI8 547 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 BBS12Q6ZW61 710 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 TTC13Q8NBP0 860 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 ACDQ96AP0 544 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 CCT8L2Q96SF2 557 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 FAM118BQ9BPY3 351 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 MAK16Q9BXY0 300 aaKnown RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 NINJ2Q9NZG7 142 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ACTL7AQ9Y615 435 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 SHROOM3Q8TF72 1996 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 TLDC2A0PJX2 215 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 GMNCA6NCL1 334 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 WASH3PC4AMC7 463 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 DFFAO00273 331 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 APOL1O14791 398 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 CST8O60676 142 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 MT-CO1P00395 513 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ASLP04424 464 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 IL12RB1P42701 662 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 VPS41P49754 854 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 MRPS21P82921 87 aaKnown RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 SULT2A1Q06520 285 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 FBXL6Q8N531 539 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 TMEM105Q8N8V8 129 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 KCNV2Q8TDN2 545 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 PCDH9Q9HC56 1237 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 POLR3BQ9NW08 1133 aaPredicted RBP19.68■□□□□ 0.74
CCM2-216ENST00000488727 C2orf42Q9NWW7 574 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 CACNA2D2Q9NY47 1150 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 SLCO3A1Q9UIG8 710 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ZNF148Q9UQR1 794 aa19.68■□□□□ 0.74
CCM2-216ENST00000488727 ARHGAP42A6NI28 874 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 E7EVH7 732 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 KDELR3O43731 214 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 ADAM23O75077 832 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 KLF8O95600 359 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms