RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TRIM5Q9C035 493 aa14.44□□□□□ -0.1
COL9A2-208ENST00000488463 ZDHHC5Q9C0B5 715 aa14.44□□□□□ -0.1
COL9A2-208ENST00000488463 ZWILCHQ9H900 591 aa14.44□□□□□ -0.1
COL9A2-208ENST00000488463 IL21RQ9HBE5 538 aa14.44□□□□□ -0.1
COL9A2-208ENST00000488463 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL9A2-208ENST00000488463 IGF2RP11717 2491 aa14.44□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3DA0A087WVF3 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3IA0A087WXS9 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3EA0A087X179 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3KA0A087X1G2 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3FA6NER0 549 aaPredicted RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3LB9A6J9 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 GIPC1O14908 333 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 AKR1B10O60218 316 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 MTA2O94776 668 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 KCNK5O95279 499 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 CD48P09326 243 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3HP0C7X1 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ITGB7P26010 798 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 CTSKP43235 329 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 RECQLP46063 649 aaPredicted RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 DNA2P51530 1060 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 RACK1P63244 317 aaKnown RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 KIF19Q2TAC6 998 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 MYLK3Q32MK0 819 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3GQ6DHY5 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3CQ6IPX1 549 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 PARS2Q7L3T8 475 aaKnown RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TBC1D3Q8IZP1 549 aaPredicted RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 CTNNBL1Q8WYA6 563 aaPredicted RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 HSPH1Q92598 858 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 MRFAP1L1Q96HT8 127 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ZDHHC6Q9H6R6 413 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 PREBQ9HCU5 417 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ZNHIT6Q9NWK9 470 aaKnown RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 DONSONQ9NYP3 566 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 CTTNBP2NLQ9P2B4 639 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 TPX2Q9ULW0 747 aaKnown RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ZFR2Q9UPR6 939 aaKnown RBP14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ANKRD6Q9Y2G4 727 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 ANKRD36A6QL64 1941 aa14.43□□□□□ -0.1
COL9A2-208ENST00000488463 USP24Q9UPU5 2620 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 VILLO15195 856 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 INSIG1O15503 277 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 POP4O95707 220 aaKnown RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 PEX11BO96011 259 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 TPM1P09493 284 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 ADRB3P13945 408 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 CSRP1P21291 193 aaKnown RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 FECHP22830 423 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 AMPD1P23109 780 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 RGRP47804 291 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 SNRPD1P62314 119 aaKnown RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 TCEAL1Q15170 157 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 ZNF284Q2VY69 593 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 HLA-BQ31612 363 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 UAP1L1Q3KQV9 507 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 TMEM259Q4ZIN3 620 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 NEK5Q6P3R8 708 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 DBX2Q6ZNG2 339 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 SLC35G2Q8TBE7 412 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 LRIG1Q96JA1 1093 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 CCDC42Q96M95 316 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 NSMCE3Q96MG7 304 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 CNTNAP3BQ96NU0 1288 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 CNTNAP3Q9BZ76 1288 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 DEF6Q9H4E7 631 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 UBA2Q9UBT2 640 aaPredicted RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 FNDC3AQ9Y2H6 1198 aaKnown RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 SNX11Q9Y5W9 270 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 MAP1BP46821 2468 aaKnown RBP14.42□□□□□ -0.1
COL9A2-208ENST00000488463 CACNA1BQ00975 2339 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 SHROOM3Q8TF72 1996 aa14.42□□□□□ -0.1
COL9A2-208ENST00000488463 LRRK1Q38SD2 2015 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ARHGAP42A6NI28 874 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 C16orf96A6NNT2 1141 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 H3BRJ5 948 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 DAPK3O43293 454 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 AP1G1O43747 822 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 OPHN1O60890 802 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 RNGTTO60942 597 aaKnown RBP14.41□□□□□ -0.1
COL9A2-208ENST00000488463 LCA5LO95447 670 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ZNF883P0CG24 379 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
COL9A2-208ENST00000488463 MAN1A1P33908 653 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ABL2P42684 1182 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 NEK3P51956 506 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 SLC14A1Q13336 389 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 DPYSL3Q14195 570 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ZNF423Q2M1K9 1284 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 TSR1Q2NL82 804 aaKnown RBP14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ZNF805Q5CZA5 627 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 ZNF354CQ86Y25 554 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 TMEM145Q8NBT3 493 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 PPP1R16AQ96I34 528 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 GDAP1L1Q96MZ0 367 aa14.41□□□□□ -0.1
COL9A2-208ENST00000488463 CPEB1Q9BZB8 566 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms