RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 HDAC7Q8WUI4 952 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 FAR1Q8WVX9 515 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 IP6K1Q92551 441 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 OTULINQ96BN8 352 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 CD180Q99467 661 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 HDHD5Q9BXW7 423 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 RBM38Q9H0Z9 239 aaKnown RBP4.68□□□□□ -1.66
ITGB1-214ENST00000488427 CATSPERBQ9H7T0 1116 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 KRCC1Q9NPI7 259 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-214ENST00000488427 OSGIN2Q9Y236 505 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 RAP2CQ9Y3L5 183 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 NALCNQ8IZF0 1738 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 NWD2Q9ULI1 1742 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 LAMC1P11047 1609 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 RPS10-NUDT3A0A1W2PQS6 291 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 TCRBV7S3A2A0A539 114 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 CD8B2A6NJW9 211 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 TPD52L2O43399 206 aaKnown RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 GUCY1B2O75343 617 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 WEE2P0C1S8 567 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 HSPA1AP0DMV8 641 aaKnown RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 HSPA1BP0DMV9 641 aaKnown RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 FCGR2AP12318 317 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 ACP5P13686 325 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 GJC1P36383 396 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 ARHGAP8P85298 464 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 BYSLQ13895 437 aaKnown RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF484Q5JVG2 852 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 IRF2BP2Q7Z5L9 587 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 CPXCR1Q8N123 301 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF366Q8N895 744 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 KAT2AQ92830 837 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 GCC1Q96CN9 775 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 Q9N2J8 555 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 ZDHHC7Q9NXF8 308 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 FEM1BQ9UK73 627 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 TMEM131LA2VDJ0 1609 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 PIK3C2BO00750 1634 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 TNRC18O15417 2968 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-214ENST00000488427 PLCH1Q4KWH8 1693 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 SYCP2Q9BX26 1530 aa4.67□□□□□ -1.66
ITGB1-214ENST00000488427 FMN1Q68DA7 1419 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 A0A0G2JK05 382 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 OR6C68A6NDL8 312 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ATG13O75143 517 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 IL1AP01583 271 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 CNPP09543 421 aaKnown RBP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 CHRNB1P11230 501 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 GPD2P43304 727 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 GPR12P47775 334 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 MVDP53602 400 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 PPATQ06203 517 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 DHX8Q14562 1220 aaKnown RBP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 SEMA3AQ14563 771 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 TAF5Q15542 800 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 LDHAL6AQ6ZMR3 332 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 TECPR1Q7Z6L1 1165 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 WDR5BQ86VZ2 330 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 UNC5CLQ8IV45 518 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 FAM217AQ8IXS0 508 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 SMAP1Q8IYB5 467 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 GHDCQ8N2G8 530 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 SCAIQ8N9R8 606 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 COG8Q96MW5 612 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 B3GNT4Q9C0J1 378 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 TTC12Q9H892 705 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ENTPD7Q9NQZ7 604 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ZBTB40Q9NUA8 1239 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ALKBH4Q9NXW9 302 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.66□□□□□ -1.66
ITGB1-214ENST00000488427 ERVK-7P63135 1459 aa4.66□□□□□ -1.66
ITGB1-214ENST00000488427 A0A096LPK6 155 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 TRBV5-7A0A0A0MS05 114 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CCDC196A0A1B0GTZ2 297 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 FAM90A8PA6NJQ4 464 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 A6NNC1 897 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 STX16-NPEPL1H3BU86 382 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 EYA2O00167 538 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 STX16O14662 325 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CYP1A2P05177 515 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 CSF1P09603 554 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 FAM90A13PP0C7W8 464 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 FAM90A24PP0C7X0 464 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 UNGP13051 313 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 ROR2Q01974 943 aaKnown RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 TRAF2Q12933 501 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 SLC12A1Q13621 1099 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 INO80DQ53TQ3 878 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 HEPHL1Q6MZM0 1159 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 SMC5Q8IY18 1101 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 GABPB2Q8TAK5 448 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-214ENST00000488427 C2CD4CQ8TF44 421 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 MASTLQ96GX5 879 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 ISCUQ9H1K1 167 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 EBF3Q9H4W6 596 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 MYH16Q9H6N6 1097 aa4.65□□□□□ -1.67
ITGB1-214ENST00000488427 ACAD9Q9H845 621 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms