RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ZNF783Q6ZMS7 281 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 TAOK1Q7L7X3 1001 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 HJURPQ8NCD3 748 aaPredicted RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 ARHGEF2Q92974 986 aaKnown RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 STAMBPL1Q96FJ0 436 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 CFAP36Q96G28 342 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ZNF419Q96HQ0 510 aaPredicted RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 XPO6Q96QU8 1125 aaKnown RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 PLA2G2FQ9BZM2 168 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 PSD3Q9NYI0 1048 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 CDH7Q9ULB5 785 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 TBC1D30Q9Y2I9 924 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 MAD1L1Q9Y6D9 718 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 PIEZO1Q92508 2521 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TYW5A2RUC4 315 aaKnown RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 J3KR12 359 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 GFRA2O00451 464 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CEBPBP17676 345 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 GCAP28676 217 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 PPP2R2AP63151 447 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TCF15Q12870 199 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 PRSS36Q5K4E3 855 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TMCO4Q5TGY1 634 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 STEAP4Q687X5 459 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CYS1Q717R9 158 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 GSDMBQ8TAX9 411 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 ZSWIM3Q96MP5 696 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SLC25A51Q9H1U9 297 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 ZMYM5Q9UJ78 669 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 MRPS23Q9Y3D9 190 aaKnown RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 POC1B-GALNT4F8VUJ3 575 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 RHOCP08134 193 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 PGAM1P18669 254 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 PRKCHP24723 683 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 MGAT1P26572 445 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 HPDP32754 393 aaPredicted RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 ACVRL1P37023 503 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 NPY2RP49146 381 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SGSHP51688 502 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SESN2P58004 480 aaPredicted RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 ZXDBP98169 803 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 MPP3Q13368 585 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SPARCL1Q14515 664 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TERF2Q15554 542 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 ARHGAP15Q53QZ3 475 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CWF19L1Q69YN2 538 aaKnown RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SUGP1Q8IWZ8 645 aaKnown RBP12.91□□□□□ -0.34
NELFE-209ENST00000488426 SIX5Q8N196 739 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 MPP5Q8N3R9 675 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 OR52K1Q8NGK4 314 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 SHKBP1Q8TBC3 707 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 FAM122AQ96E09 287 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 KXD1Q9BQD3 176 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 PDFQ9HBH1 243 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 BFARQ9NZS9 450 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 CTNNAL1Q9UBT7 734 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TTLL3Q9Y4R7 772 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 ACTL7BQ9Y614 415 aa12.91□□□□□ -0.34
NELFE-209ENST00000488426 TSPAN3O60637 253 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 HOXD9P28356 352 aaPredicted RBP12.9□□□□□ -0.34
NELFE-209ENST00000488426 SLC10A7Q0GE19 358 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 CDH17Q12864 832 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.34
NELFE-209ENST00000488426 ARMC3Q5W041 872 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 FLCNQ8NFG4 579 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 IMP4Q96G21 291 aaKnown RBP12.9□□□□□ -0.34
NELFE-209ENST00000488426 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 PLAC1Q9HBJ0 212 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 NT5MQ9NPB1 228 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 CA14Q9ULX7 337 aa12.9□□□□□ -0.34
NELFE-209ENST00000488426 KDELR3O43731 214 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 C1QAP02745 245 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 MSH2P43246 934 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 OXCT1P55809 520 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 NHLH1Q02575 133 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
NELFE-209ENST00000488426 TMED2Q15363 201 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 IL31Q6EBC2 164 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 TANGO2Q6ICL3 276 aa12.89□□□□□ -0.35
NELFE-209ENST00000488426 CASC4Q6P4E1 433 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms