RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ICKQ9UPZ9 632 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 LAS1LQ9Y4W2 734 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 CYP46A1Q9Y6A2 500 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 ITIH6Q6UXX5 1313 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 GAGE12JA6NER3 117 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM90A7PA6NKC0 464 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM90A22PA8MWA6 464 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM90A12PA8MX19 464 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM90A23PA8MXZ1 464 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 TEX22C9J3V5 150 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 NEURL1O76050 574 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CCNDBP1O95273 360 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 ADAP00813 363 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CHMP24386 653 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 GGT5P36269 586 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CTCFP49711 727 aaPredicted RBP4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CASP6P55212 293 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 EIF3BP55884 814 aaKnown RBP4□□□□□ -1.77
HMGB1P36-201ENST00000487709 GEMIN4P57678 1058 aaKnown RBP4□□□□□ -1.77
HMGB1P36-201ENST00000487709 GOLGA8DPQ0D2H9 430 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 RUNX2Q13950 521 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 VEPH1Q14D04 833 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF766Q5HY98 468 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 SH2D4BQ5SQS7 431 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 C4orf50Q6ZRC1 276 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 COLCA1Q6ZS62 124 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 C18orf65Q6ZTR6 163 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 GSTA5Q7RTV2 222 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 KDELC2Q7Z4H8 507 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 TADA2BQ86TJ2 420 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 MON1AQ86VX9 555 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CHD1LQ86WJ1 897 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZDHHC23Q8IYP9 409 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMEM217Q8N7C4 229 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 EXD3Q8N9H8 876 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZMIZ2Q8NF64 920 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 UCMAQ8WVF2 138 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 LPAR1Q92633 364 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 KLHL29Q96CT2 875 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 TIGD1Q96MW7 591 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 C7orf26Q96N11 449 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P36-201ENST00000487709 OLA1Q9NTK5 396 aaKnown RBP4□□□□□ -1.77
HMGB1P36-201ENST00000487709 BABAM1Q9NWV8 329 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 KCND2Q9NZV8 630 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CDH22Q9UJ99 828 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 CLDN16Q9Y5I7 305 aa4□□□□□ -1.77
HMGB1P36-201ENST00000487709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 A0A1W2PPH5 198 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TYW5A2RUC4 315 aaKnown RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TLR2O60603 784 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MTA2O94776 668 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMEM63AO94886 807 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 COX7A2P14406 83 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC2A4P14672 509 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 ABCD3P28288 659 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 FMO4P31512 558 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 ABCD1P33897 745 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MAN1A1P33908 653 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 CASP2P42575 452 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 ME1P48163 572 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 EFNB1P98172 346 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MPP1Q00013 466 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TDGQ13569 410 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MAPRE1Q15691 268 aaKnown RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 INPP5JQ15735 1006 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MANEAQ5SRI9 462 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 DAB2IPQ5VWQ8 1189 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 PRSS45Q7RTY3 260 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 LRRC57Q8N9N7 239 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 SETD9Q8NE22 299 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 CMASQ8NFW8 434 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 RFFLQ8WZ73 363 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 KAT2AQ92830 837 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 NLRP4Q96MN2 994 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 CAMK1GQ96NX5 476 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 MAF1Q9H063 256 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLCO5A1Q9H2Y9 848 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC32A1Q9H598 525 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 FZD3Q9NPG1 666 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TLR8Q9NR97 1041 aaKnown RBP3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 ATP8A2Q9NTI2 1148 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZDHHC7Q9NXF8 308 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 PEMTQ9UBM1 199 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 PCDHGB5Q9Y5G0 923 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 HS3ST3B1Q9Y662 390 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 NOTCH4Q99466 2003 aa3.99□□□□□ -1.77
HMGB1P36-201ENST00000487709 TRBV5-3A0A0A0MS03 114 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 KRT86O43790 486 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 CNOT3O75175 753 aaKnown RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 BAIAP3O94812 1187 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 F9P00740 461 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 KLKB1P03952 638 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 TGFB3P10600 412 aa3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF8P17098 575 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 TBXAS1P24557 533 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P36-201ENST00000487709 MT3P25713 68 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms