RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 F8VZ95 297 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 H3BM21 787 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 GOLGA8SH3BPF8 625 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 RNF103O00237 685 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 AP1G1O43747 822 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 SRGAP2O75044 1071 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 ZNF821O75541 412 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 MT-CO3P00414 261 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 GP1BAP07359 652 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 GIMD1P0DJR0 217 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 NME1P15531 152 aaKnown RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 L1CAMP32004 1257 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 ETFBP38117 255 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 CCNHP51946 323 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 CLDN2P57739 230 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 HNRNPKP61978 463 aaKnown RBP eCLIP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 NOMO3P69849 1222 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 ARF5P84085 180 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 GNA12Q03113 381 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 KLHDC7AQ5VTJ3 777 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 TAF3Q5VWG9 929 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 TRNP1Q6NT89 227 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 DPY19L2P1Q6NXN4 242 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 KDM7AQ6ZMT4 941 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 Q6ZSR6 202 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 NOP9Q86U38 636 aaKnown RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 PARGQ86W56 976 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 FAM181AQ8N9Y4 354 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 ZNF548Q8NEK5 533 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 CFAP57Q96MR6 1250 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 FCRL3Q96P31 734 aaPredicted RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 HEPHQ9BQS7 1158 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 SPON2Q9BUD6 331 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 NAA15Q9BXJ9 866 aaKnown RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 DNAJC28Q9NX36 388 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 PPARGC1AQ9UBK2 798 aaKnown RBP8.7□□□□□ -1.02
PRKCB-208ENST00000487674 TMEM59LQ9UK28 342 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 FADS3Q9Y5Q0 445 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 HS3ST3A1Q9Y663 406 aa8.7□□□□□ -1.02
PRKCB-208ENST00000487674 LY6G6EA0A0G2JKS1 128 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 SPTY2D1-AS1A0A0U1RR47 76 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 SCAMP1O15126 338 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 TSPAN6O43657 245 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 OPA1O60313 960 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ENDOD1O94919 500 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 UCHL3P15374 230 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ERCC5P28715 1186 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 RABIFP47224 123 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 MAPKAPK2P49137 400 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 DUSP3P51452 185 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 DNA2P51530 1060 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 GEMIN4P57678 1058 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 NRG1Q02297 640 aaPredicted RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 TLE3Q04726 772 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 FGL2Q14314 439 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 FZD2Q14332 565 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ARL13BQ3SXY8 428 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 C2CD6Q53TS8 623 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 CARD16Q5EG05 197 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 MANEALQ5VSG8 457 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 NAA35Q5VZE5 725 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ZCCHC8Q6NZY4 707 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 PARS2Q7L3T8 475 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 TMC6Q7Z403 805 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ZNF677Q86XU0 584 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 DRC7Q8IY82 874 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 DENND6BQ8NEG7 585 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 RAB7BQ96AH8 199 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ISG20Q96AZ6 181 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 FEM1CQ96JP0 617 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 APOLD1Q96LR9 279 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 SLC17A9Q9BYT1 436 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 STK33Q9BYT3 514 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 TM6SF2Q9BZW4 377 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 CLSTN2Q9H4D0 955 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 RETREG1Q9H6L5 497 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 ZDHHC6Q9H6R6 413 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 METTL5Q9NRN9 209 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 FCF1Q9Y324 198 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 U3KQA8 63 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
PRKCB-208ENST00000487674 SHROOM3Q8TF72 1996 aa8.69□□□□□ -1.02
PRKCB-208ENST00000487674 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
PRKCB-208ENST00000487674 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
PRKCB-208ENST00000487674 FAM170AA1A519 330 aa8.68□□□□□ -1.02
PRKCB-208ENST00000487674 POM121BA6NF01 834 aa8.68□□□□□ -1.02
PRKCB-208ENST00000487674 K7ESM1 405 aa8.68□□□□□ -1.02
PRKCB-208ENST00000487674 PES1O00541 588 aaKnown RBP8.68□□□□□ -1.02
PRKCB-208ENST00000487674 FPGTO14772 594 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms