RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 APOL1O14791 398 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 LEFTY1O75610 366 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 MX2P20592 715 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 CCNCP24863 283 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ITGB7P26010 798 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ACSL1P33121 698 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HOXD12P35452 270 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HSPA9P38646 679 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 RGRP47804 291 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 RHOAP61586 193 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PPIDQ08752 370 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 SLC10A7Q0GE19 358 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HNRNPDQ14103 355 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 TFDP2Q14188 446 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 LBRQ14739 615 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 LPAL2Q16609 132 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 MYLK3Q32MK0 819 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ZFYVE27Q5T4F4 411 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ALG1LQ6GMV1 187 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 TIGD7Q6NT04 549 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PRR23BQ6ZRT6 265 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 BBS12Q6ZW61 710 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 LPCAT2Q7L5N7 544 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ZNF354CQ86Y25 554 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 CACUL1Q86Y37 369 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 SLC41A1Q8IVJ1 513 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 TSEN2Q8NCE0 465 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HCAR2Q8TDS4 363 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ANP32BQ92688 251 aaKnown RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 ARRDC3Q96B67 414 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 MGME1Q9BQP7 344 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HDAC8Q9BY41 377 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 BTBD1Q9H0C5 482 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 FBXL12Q9NXK8 326 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 HECAQ9UBI9 543 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-207ENST00000487447 SEPT3Q9UH03 358 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 AMFRQ9UKV5 643 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 RAB23Q9ULC3 237 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 NCKAP1Q9Y2A7 1128 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PLXNA2O75051 1894 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 PCDH15Q96QU1 1955 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 METTL12A8MUP2 240 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 MUSKO15146 869 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 MATN3O15232 486 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 PLRG1O43660 514 aaKnown RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 SEMA4FO95754 770 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 KRT10P13645 584 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TGM2P21980 687 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TGM1P22735 817 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 DPP6P42658 865 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 PTGER3P43115 390 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 NR2C2P49116 596 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 ADPRHP54922 357 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 NAP1L1P55209 391 aaKnown RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 RWDD2BP57060 319 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TAS2R38P59533 333 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 RPL6Q02878 288 aaKnown RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 CNTN1Q12860 1018 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 GRM3Q14832 879 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 RALGPS1Q5JS13 557 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 ATXN7L2Q5T6C5 722 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 PEX26Q7Z412 305 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 PGBD5Q8N414 524 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 HDDC3Q8N4P3 179 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 FOXJ1Q92949 421 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 ECHDC3Q96DC8 303 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 PPP1R16AQ96I34 528 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TUBGCP5Q96RT8 1024 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 OMDQ99983 421 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 BRD8Q9H0E9 1235 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 NEUROG2Q9H2A3 272 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 DKK3Q9UBP4 350 aa11.82□□□□□ -0.52
CLIP2-207ENST00000487447 TPX2Q9ULW0 747 aaKnown RBP11.82□□□□□ -0.52
CLIP2-207ENST00000487447 ABCA7Q8IZY2 2146 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 KPNA3O00505 521 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-207ENST00000487447 MAP3K13O43283 966 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 LATO43561 262 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 AP1G1O43747 822 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 BNIP3LO60238 219 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 CST8O60676 142 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 RNASEH2AO75792 299 aaKnown RBP11.81□□□□□ -0.52
CLIP2-207ENST00000487447 PYGMP11217 842 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 TNNT1P13805 278 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 MAPK8P45983 427 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 RENBPP51606 427 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 AP1S1P61966 158 aa11.81□□□□□ -0.52
CLIP2-207ENST00000487447 IFI35P80217 286 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-207ENST00000487447 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms