RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RABGEF1Q9UJ41 708 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 ITM2BQ9Y287 266 aa15.65■□□□□ 0.1
MCF2L-228ENST00000487354 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-228ENST00000487354 UNC13CQ8NB66 2214 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 IGLV3-10A0A075B6K4 115 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 IGLON5A6NGN9 336 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 RIOK3O14730 519 aaKnown RBP15.64■□□□□ 0.09
MCF2L-228ENST00000487354 MED7O43513 233 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.09
MCF2L-228ENST00000487354 CELA2BP08218 269 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-228ENST00000487354 BMP6P22004 513 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 IGFALSP35858 605 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 CXCR3P49682 368 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 SERPINH1P50454 418 aaKnown RBP15.64■□□□□ 0.09
MCF2L-228ENST00000487354 APBA1Q02410 837 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 TGIF1Q15583 401 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 EFHC1Q5JVL4 640 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 SLC26A9Q7LBE3 791 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 TFAP2DQ7Z6R9 452 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 PASD1Q8IV76 773 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 ARL14Q8N4G2 192 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 PPP1R16AQ96I34 528 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 PPP1R13BQ96KQ4 1090 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 NPY6RQ99463 290 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 SCAND2PQ9GZW5 306 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-228ENST00000487354 ACSL6Q9UKU0 697 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 PCDHGA7Q9Y5G6 932 aa15.64■□□□□ 0.09
MCF2L-228ENST00000487354 SPENQ96T58 3664 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 LMO7DNF2Z398 122 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 M0QYT0 321 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 SLC5A2P31639 672 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 MARSP56192 900 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 MTA1Q13330 715 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 C1orf61Q13536 156 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 PTPN20Q4JDL3 420 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 NYAP1Q6ZVC0 841 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 PHACTR4Q8IZ21 702 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 C1orf131Q8NDD1 294 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 DENND6BQ8NEG7 585 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 ZNF397Q8NF99 534 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 ASB12Q8WXK4 309 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 NT5C3BQ969T7 300 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 CENPTQ96BT3 561 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 DHTKD1Q96HY7 919 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 FEM1CQ96JP0 617 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 TBATAQ96M53 351 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 IL12RB2Q99665 862 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 GTPBP4Q9BZE4 634 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 CEP44Q9C0F1 390 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 TKTL2Q9H0I9 626 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 UBE2TQ9NPD8 197 aaPredicted RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 APOBEC3BQ9UH17 382 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 PCDHGC3Q9UN70 934 aa15.63■□□□□ 0.09
MCF2L-228ENST00000487354 FCF1Q9Y324 198 aaKnown RBP15.63■□□□□ 0.09
MCF2L-228ENST00000487354 FPGTO14772 594 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 PSMA7O14818 248 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 HGFP14210 728 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 GKP32189 559 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 NOS2P35228 1153 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 ADKP55263 362 aaKnown RBP15.62■□□□□ 0.09
MCF2L-228ENST00000487354 CETN1Q12798 172 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 PRRT3Q5FWE3 981 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 C11orf57Q6ZUT1 292 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-228ENST00000487354 PCDH20Q8N6Y1 951 aaKnown RBP15.62■□□□□ 0.09
MCF2L-228ENST00000487354 KYQ8NBH2 561 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 EXTL1Q92935 676 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 NAT6Q93015 286 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 HEPHQ9BQS7 1158 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 SPASTQ9UBP0 616 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 AJAP1Q9UKB5 411 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-228ENST00000487354 SDK2Q58EX2 2172 aa15.62■□□□□ 0.09
MCF2L-228ENST00000487354 NBPF19A0A087WUL8 3843 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 A0A1W2PQM1 296 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 PPP1R3GB7ZBB8 358 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 D6RAR5 112 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 PLD2O14939 933 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 YY2O15391 372 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 AFPP02771 609 aaKnown RBP15.61■□□□□ 0.09
MCF2L-228ENST00000487354 TSHRP16473 764 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 WT1P19544 449 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-228ENST00000487354 UGT1A5P35504 534 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 SLC6A3Q01959 620 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 SPIDRQ14159 915 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 CARD16Q5EG05 197 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 COLEC12Q5KU26 742 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 ISM2Q6H9L7 571 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 TRNP1Q6NT89 227 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 FOXR2Q6PJQ5 311 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 BNIPLQ7Z465 357 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 ZSCAN30Q86W11 494 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 WDR48Q8TAF3 677 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 SMARCE1Q969G3 411 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 PGAP3Q96FM1 320 aaPredicted RBP15.61■□□□□ 0.09
MCF2L-228ENST00000487354 MAN1B1Q9UKM7 699 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 PADI4Q9UM07 663 aa15.61■□□□□ 0.09
MCF2L-228ENST00000487354 LRRK2Q5S007 2527 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 ILVBLA1L0T0 632 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 C16orf96A6NNT2 1141 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms