RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CARD16Q5EG05 197 aa19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 GBP6Q6ZN66 633 aa19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 RBM44Q6ZP01 1051 aaKnown RBP19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 ZDHHC17Q8IUH5 632 aa19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 LENG8Q96PV6 779 aaPredicted RBP19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 TBCBQ99426 244 aa19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 C1QTNF2Q9BXJ5 285 aa19.81■□□□□ 0.76
SMPDL3A-202ENST00000487215 IGLON5A6NGN9 336 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 K7ENP7 123 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 RIOK3O14730 519 aaKnown RBP19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 TPP1O14773 563 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 FGFR1OPO95684 399 aaKnown RBP19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 F9P00740 461 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 KRT9P35527 623 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 ABL2P42684 1182 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 PFN3P60673 137 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 NR0B2Q15466 257 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 PERM1Q5SV97 790 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 KIAA1614Q5VZ46 1190 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 INO80CQ6PI98 192 aaPredicted RBP19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 ZNF783Q6ZMS7 281 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 SLC47A2Q86VL8 602 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 ZSCAN30Q86W11 494 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 RBFAQ8N0V3 343 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 TPCN2Q8NHX9 752 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 IL12RB2Q99665 862 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 ATP13A1Q9HD20 1204 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 FCF1Q9Y324 198 aaKnown RBP19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 PAXBP1Q9Y5B6 917 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 ACTL7AQ9Y615 435 aa19.8■□□□□ 0.76
SMPDL3A-202ENST00000487215 CDRT15L2A8MXV6 281 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 PYCARD-AS1I3L0S3 204 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 MUSKO15146 869 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 CASC3O15234 703 aaKnown RBP19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 SRGAP2O75044 1071 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 TCEA3O75764 348 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 PNMA6AP0CW24 399 aaPredicted RBP19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 CLCN1P35523 988 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 SLC20A2Q08357 652 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 SGCGQ13326 291 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 EXOC3L4Q17RC7 722 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 SLC25A52Q3SY17 297 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 ACBD5Q5T8D3 534 aaPredicted RBP19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 FOXR1Q6PIV2 292 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 CCDC97Q96F63 343 aaPredicted RBP19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 BOCQ9BWV1 1114 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 TCEAL2Q9H3H9 227 aaPredicted RBP19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 ZDHHC6Q9H6R6 413 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 GGT7Q9UJ14 662 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 ITM2BQ9Y287 266 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 TRPM6Q9BX84 2022 aa19.79■□□□□ 0.76
SMPDL3A-202ENST00000487215 TSPAN6O43657 245 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 CD160O95971 181 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 PON1P27169 355 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 GKP32189 559 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 PDX1P52945 283 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 GNA12Q03113 381 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 CREBRFQ8IUR6 639 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 SLC35F3Q8IY50 421 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 DENND6BQ8NEG7 585 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 BTN2A2Q8WVV5 523 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 ASB12Q8WXK4 309 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 MED8Q96G25 268 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 TM6SF2Q9BZW4 377 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 ZYG11BQ9C0D3 744 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 SIX2Q9NPC8 291 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 HECAQ9UBI9 543 aaPredicted RBP19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 SPASTQ9UBP0 616 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 APOBEC3BQ9UH17 382 aaKnown RBP19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 COL6A6A6NMZ7 2263 aa19.78■□□□□ 0.76
SMPDL3A-202ENST00000487215 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 FOXN3O00409 490 aaPredicted RBP19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 GCATO75600 419 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 FLT3P36888 993 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 CLN3Q13286 438 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 C1orf61Q13536 156 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 C6orf132Q5T0Z8 1188 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 FAM102AQ5T9C2 384 aaPredicted RBP19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 SMYD5Q6GMV2 418 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 CLEC14AQ86T13 490 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 DRC7Q8IY82 874 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 ARL14Q8N4G2 192 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 OR6K2Q8NGY2 324 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 WDR36Q8NI36 951 aaKnown RBP19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 NAT6Q93015 286 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 RAB7BQ96AH8 199 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 HAPLN3Q96S86 360 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 LRRC61Q9BV99 259 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 DNAJC12Q9UKB3 198 aa19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 PNMA8BQ9ULN7 279 aaPredicted RBP19.77■□□□□ 0.76
SMPDL3A-202ENST00000487215 FAM170AA1A519 330 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 C16orf96A6NNT2 1141 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 CYSRT1A8MQ03 144 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 NEMP1O14524 444 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 TNFSF15O95150 251 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 KRT10P13645 584 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 SCNN1AP37088 669 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 MLLT3P42568 568 aaPredicted RBP19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 GABRB2P47870 512 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 RPIAP49247 311 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms