RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 ELP4Q96EB1 424 aa5.37□□□□□ -1.55
TRA2A-207ENST00000486934 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
TRA2A-207ENST00000486934 FBXO40Q9UH90 709 aa5.37□□□□□ -1.55
TRA2A-207ENST00000486934 MYO6Q9UM54 1294 aa5.37□□□□□ -1.55
TRA2A-207ENST00000486934 PABPN1LA6NDY0 278 aaKnown RBP5.36□□□□□ -1.55
TRA2A-207ENST00000486934 OR6C75A6NL08 312 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 MS4A18H0YCH9 400 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 J3KR12 359 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 WEE2P0C1S8 567 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 TNNT1P13805 278 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 CNTFP26441 200 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 CCKBRP32239 447 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 RFC1P35251 1148 aaPredicted RBP5.36□□□□□ -1.55
TRA2A-207ENST00000486934 LTBQ06643 244 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 CRYZQ08257 329 aaKnown RBP5.36□□□□□ -1.55
TRA2A-207ENST00000486934 ANKRD1Q15327 319 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 SHBQ15464 509 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 WDR45BQ5MNZ6 344 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 LRRTM4Q86VH4 590 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 MCPH1Q8NEM0 835 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 SLC35F5Q8WV83 523 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 HSPH1Q92598 858 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 GCC1Q96CN9 775 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 ZNF333Q96JL9 665 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 UBXN10Q96LJ8 280 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 CATSPERBQ9H7T0 1116 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 CLK4Q9HAZ1 481 aaKnown RBP5.36□□□□□ -1.55
TRA2A-207ENST00000486934 PLK2Q9NYY3 685 aa5.36□□□□□ -1.55
TRA2A-207ENST00000486934 HBP1O60381 514 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 IL1AP01583 271 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 POLBP06746 335 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 CHRM4P08173 479 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 ENO3P13929 434 aaPredicted RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 ZNF12P17014 697 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 YWHAQP27348 245 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 TKTP29401 623 aaKnown RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 MLH1P40692 756 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 EFNA5P52803 228 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 ZXDBP98169 803 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 CHRNDQ07001 517 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 CAPSQ13938 189 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 CTTNQ14247 550 aaKnown RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 DNTTIP2Q5QJE6 756 aaKnown RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 ATG16L1Q676U5 607 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 MON1AQ86VX9 555 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 RUFY2Q8WXA3 655 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 ZSCAN31Q96LW9 406 aaPredicted RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 PSMD1Q99460 953 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 SF3B5Q9BWJ5 86 aaKnown RBP5.35□□□□□ -1.55
TRA2A-207ENST00000486934 TAOK3Q9H2K8 898 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 EPHX3Q9H6B9 360 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 FZD10Q9ULW2 581 aa5.35□□□□□ -1.55
TRA2A-207ENST00000486934 PLEKHD1A6NEE1 506 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 C4orf47A7E2U8 309 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 ANP32CO43423 234 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 EIF3JO75822 258 aaKnown RBP5.34□□□□□ -1.55
TRA2A-207ENST00000486934 CENPAP49450 140 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 ENTPD1P49961 510 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 OTUD1Q5VV17 481 aaPredicted RBP5.34□□□□□ -1.55
TRA2A-207ENST00000486934 GHDCQ8N2G8 530 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 IQCF1Q8N6M8 205 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 PLD5Q8N7P1 536 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 RBMXL3Q8N7X1 1067 aaKnown RBP5.34□□□□□ -1.55
TRA2A-207ENST00000486934 MIGA1Q8NAN2 632 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 USP38Q8NB14 1042 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 TMEM163Q8TC26 289 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 MORC4Q8TE76 937 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
TRA2A-207ENST00000486934 YME1L1Q96TA2 773 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 EYA3Q99504 573 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.34□□□□□ -1.55
TRA2A-207ENST00000486934 CNPY2Q9Y2B0 182 aa5.34□□□□□ -1.55
TRA2A-207ENST00000486934 SRRM3A6NNA2 597 aaPredicted RBP5.33□□□□□ -1.56
TRA2A-207ENST00000486934 TIMM23O14925 209 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 CEP104O60308 925 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 HOXC6P09630 235 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 HOXD3P31249 432 aaPredicted RBP5.33□□□□□ -1.56
TRA2A-207ENST00000486934 RYKP34925 604 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 UBE3AQ05086 875 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 FAM27E3Q08E93 113 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 LPIN1Q14693 890 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 NAA25Q14CX7 972 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 FSCBQ5H9T9 825 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 SPATA2LQ8IUW3 424 aaPredicted RBP5.33□□□□□ -1.56
TRA2A-207ENST00000486934 CLIP4Q8N3C7 705 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 DNAAF1Q8NEP3 725 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 GDPD5Q8WTR4 605 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 PHF21BQ96EK2 531 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 RRN3Q9NYV6 651 aa5.33□□□□□ -1.56
TRA2A-207ENST00000486934 ARID4BQ4LE39 1312 aaPredicted RBP5.32□□□□□ -1.56
TRA2A-207ENST00000486934 C17orf113A0A1B0GUU1 675 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 LACTBL1A8MY62 500 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 PPP1R3DO95685 299 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 URODP06132 367 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 CDC25AP30304 524 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 GRSF1Q12849 480 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRA2A-207ENST00000486934 PRSS45Q7RTY3 260 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 CHD1LQ86WJ1 897 aa5.32□□□□□ -1.56
TRA2A-207ENST00000486934 TMC8Q8IU68 726 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms