RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PCNX2A6NKB5 2137 aa13.37□□□□□ -0.27
SF1-216ENST00000486867 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
SF1-216ENST00000486867 LRRD1A4D1F6 860 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 GOLGA6L3A6NEY3 463 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 DFFAO00273 331 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 AP1G1O43747 822 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 SPOPO43791 374 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 RNASEH2AO75792 299 aaKnown RBP13.36□□□□□ -0.27
SF1-216ENST00000486867 IGSF6O95976 241 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 IGHV4-34P06331 123 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 GJC1P36383 396 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 GARSP41250 739 aaKnown RBP13.36□□□□□ -0.27
SF1-216ENST00000486867 CDKN2BP42772 138 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 CREB5Q02930 508 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 CCDC15Q0P6D6 951 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 GRM3Q14832 879 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 WDR45BQ5MNZ6 344 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 SYCP2LQ5T4T6 812 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 KIAA0895LQ68EN5 471 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 NEK5Q6P3R8 708 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 SLC23A3Q6PIS1 610 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 FAM124AQ86V42 546 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 TEX26Q8N6G2 289 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 NETO2Q8NC67 525 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 CEP76Q8TAP6 659 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 HCAR2Q8TDS4 363 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 MAML1Q92585 1016 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 SP110Q9HB58 689 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 PREBQ9HCU5 417 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 DKK3Q9UBP4 350 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
SF1-216ENST00000486867 TSPAN11A1L157 253 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 LRRC72A6NJI9 287 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 KPNA3O00505 521 aaPredicted RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 CR2P20023 1033 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 CTNNA2P26232 953 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 CTNNA1P35221 906 aaKnown RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 NUDT1P36639 197 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 RHOAP61586 193 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 CCZ1BP86790 482 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 CCZ1P86791 482 aaPredicted RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 SLC10A7Q0GE19 358 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 SLC10A2Q12908 348 aaPredicted RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 DUOXA1Q1HG43 343 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ZNF805Q5CZA5 627 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 DCAF12L1Q5VU92 463 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 NCEH1Q6PIU2 408 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 DAAM2Q86T65 1068 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 TRIM69Q86WT6 500 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ZNF354CQ86Y25 554 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 RNF10Q8N5U6 811 aaKnown RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
SF1-216ENST00000486867 EXD1Q8NHP7 514 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 PIGKQ92643 395 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 DESI2Q9BSY9 194 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 SUSD2Q9UGT4 822 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 AMACRQ9UHK6 382 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
SF1-216ENST00000486867 CACNA1AO00555 2505 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 A0A0U1RQJ8 604 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 PLK4O00444 970 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 MUSKO15146 869 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 BNIP3LO60238 219 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 PALMO75781 387 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 KRT1P04264 644 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 SERPINF2P08697 491 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 ZFXP17010 805 aaPredicted RBP13.34□□□□□ -0.27
SF1-216ENST00000486867 MX2P20592 715 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 CCNCP24863 283 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 CD27P26842 260 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 PTPN7P35236 360 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 RGRP47804 291 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 MARCKSL1P49006 195 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 PEX5P50542 639 aa13.34□□□□□ -0.27
SF1-216ENST00000486867 DNA2P51530 1060 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms