RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RAB10P61026 200 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 CTBP1Q13363 440 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 ZRSR2Q15696 482 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 LRRC8EQ6NSJ5 796 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MSANTD2Q6P1R3 559 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MON1AQ86VX9 555 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 LMNTD2Q8IXW0 634 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 DCP1BQ8IZD4 617 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 CENPLQ8N0S6 344 aaPredicted RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 PHTF2Q8N3S3 785 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MAPK15Q8TD08 544 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 SCG3Q8WXD2 468 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MIEF2Q96C03 454 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 SCYL1Q96KG9 808 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 TRMT13Q9NUP7 481 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 DNAJB4Q9UDY4 337 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 SLC2A6Q9UGQ3 507 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 IPO11Q9UI26 975 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 TLR6Q9Y2C9 796 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 ACOT9Q9Y305 439 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
PDLIM7-207ENST00000486828 MYLKQ15746 1914 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 TARM1B6A8C7 271 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 MATN2O00339 956 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 DCXO43602 365 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 ZBTB14O43829 449 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 OAZ2O95190 189 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 CHRNGP07510 517 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 GLDCP23378 1020 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 MPSTP25325 297 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 CDC25CP30307 473 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 PGGT1BP53609 377 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 PIK3R6Q5UE93 754 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 KIAA0930Q6ICG6 404 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 GLB1LQ6UWU2 654 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 ZNF280BQ86YH2 543 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 MFSD6LQ8IWD5 586 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 FSTL5Q8N475 847 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 C2CD4AQ8NCU7 369 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 PPFIBP2Q8ND30 876 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC39A13Q96H72 371 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 FAM167BQ9BTA0 163 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 FTHL17Q9BXU8 183 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 PRKD2Q9BZL6 878 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 NOL6Q9H6R4 1146 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 MAN1C1Q9NR34 630 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 MRPL42Q9Y6G3 142 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-207ENST00000486828 E9PBE3 544 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CCNT2O60583 730 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 KLHL41O60662 606 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ANPEPP15144 967 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 STMN1P16949 149 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CRABP2P29373 138 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC1A2P43004 574 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 GLRBP48167 497 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 RPL14P50914 215 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 AP2B1P63010 937 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 BTKQ06187 659 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 DSC1Q08554 894 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CNGA3Q16281 694 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 RALGPS1Q5JS13 557 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ARMC3Q5W041 872 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ANO7Q6IWH7 933 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CEP97Q8IW35 865 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 NUP93Q8N1F7 819 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 UMODL1-AS1Q8N2C9 162 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ACTRT2Q8TDY3 377 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 FUBP3Q96I24 572 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 C8orf48Q96LL4 319 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 TCF7L2Q9NQB0 619 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 SRRDQ9UH36 339 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 TMEM189-UBE2V1I3L0A0 370 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 HDAC3O15379 428 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 FKBP6O75344 327 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 PEX11BO96011 259 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC2A3P11169 496 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 COX4I1P13073 169 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 HOXD10P28358 340 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CHRNA4P43681 627 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 CD151P48509 253 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 KLF10Q13118 480 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 PRKAA1Q13131 559 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 TMCO4Q5TGY1 634 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 SDHAF4Q5VUM1 108 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 PGM2L1Q6PCE3 622 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 KDELC1Q6UW63 502 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ZNF683Q8IZ20 524 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 PCSK9Q8NBP7 692 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 AGR3Q8TD06 166 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 STON2Q8WXE9 905 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 FATE1Q969F0 183 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 GPR78Q96P69 363 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 OR52B2Q96RD2 323 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 SLC25A51Q9H1U9 297 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 FBXO44Q9H4M3 255 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 ARNT2Q9HBZ2 717 aa18.19■□□□□ 0.5
PDLIM7-207ENST00000486828 PLXNA3P51805 1871 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms