RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 HAUS2Q9NVX0 235 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 RSPH14Q9UHP6 348 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 NDRG2Q9UN36 371 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.86
MCF2L-227ENST00000486806 TTLL3Q9Y4R7 772 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.86
MCF2L-227ENST00000486806 EDDM13A0A1B0GTR0 161 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 TP73O15350 636 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 INSIG1O15503 277 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 ADAM23O75077 832 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 NEBLO76041 1014 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 HEXIM1O94992 359 aaKnown RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 C7P10643 843 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 HLA-EP13747 358 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 TIE1P35590 1138 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 ACTN2P35609 894 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 FDFT1P37268 417 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 MAPK8P45983 427 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 VPS41P49754 854 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 CCNHP51946 323 aaPredicted RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 AP1S1P61966 158 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SNRPD1P62314 119 aaKnown RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SKOR1P84550 965 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SIGLEC14Q08ET2 396 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 GPS1Q13098 491 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 LRRC32Q14392 662 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 CARD16Q5EG05 197 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 C9orf64Q5T6V5 341 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 FAXCQ5TGI0 409 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 DUPD1Q68J44 220 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 KCTD11Q693B1 232 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 NCEH1Q6PIU2 408 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 KDELC1Q6UW63 502 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 DPY19L3Q6ZPD9 716 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 Q6ZS52 159 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 TRMT11Q7Z4G4 463 aaKnown RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 CHPFQ8IZ52 775 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SYNPOQ8N3V7 929 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 ZNF366Q8N895 744 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 PJA1Q8NG27 643 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SPATA22Q8NHS9 363 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 PPP1R2P1Q96PQ5 205 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 ERP44Q9BS26 406 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 OSBPL6Q9BZF3 934 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 FOXQ1Q9C009 403 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 MTG2Q9H4K7 406 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 TBC1D17Q9HA65 648 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 NOD2Q9HC29 1040 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 EIF2B3Q9NR50 452 aaKnown RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 RAB6BQ9NRW1 208 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 VPS45Q9NRW7 570 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 ASIC3Q9UHC3 531 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 SLC8A2Q9UPR5 921 aa9.7□□□□□ -0.86
MCF2L-227ENST00000486806 MTF2Q9Y483 593 aaPredicted RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
MCF2L-227ENST00000486806 A0A1W2PQF6 199 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TTC24A2A3L6 582 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TARSL2A2RTX5 802 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CHURC1-FNTBB4DL54 471 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 F5H423 210 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TRAFD1O14545 582 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 DNALI1O14645 258 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 DCXO43602 365 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SIN3BO75182 1162 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TMEM63AO94886 807 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SEC31AO94979 1220 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 KLF8O95600 359 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 AP2A1O95782 977 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 MT-CYBP00156 380 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CTSLP07711 333 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CES1P23141 567 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 NTSR1P30989 418 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CD86P42081 329 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 RPL21P46778 160 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SCNN1BP51168 640 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 BASP1P80723 227 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SLC7A5Q01650 507 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CAMK2GQ13555 558 aaPredicted RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 GAS6Q14393 721 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 ELAVL3Q14576 367 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 ACCSLQ4AC99 568 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 C2orf27AQ580R0 203 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 MIA3Q5JRA6 1907 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TEX35Q5T0J7 233 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 RNASEH2BQ5TBB1 312 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CWF19L1Q69YN2 538 aaKnown RBP9.69□□□□□ -0.86
MCF2L-227ENST00000486806 PKN3Q6P5Z2 889 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SRLQ86TD4 932 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CHST14Q8NCH0 376 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 OR6K2Q8NGY2 324 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 RPLP0P6Q8NHW5 317 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CPT1BQ92523 772 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 SPOCK2Q92563 424 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 EDAQ92838 391 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 CLDN23Q96B33 292 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 TUBGCP5Q96RT8 1024 aa9.69□□□□□ -0.86
MCF2L-227ENST00000486806 RBM15Q96T37 977 aaKnown RBP eCLIP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms