RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 B4GAT1O43505 415 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 TPST1O60507 370 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 MYO1DO94832 1006 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 CPNE6O95741 557 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 TCEA1P23193 301 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 HPCAL1P37235 193 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 CAP2P40123 477 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 PTGER2P43116 358 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 PTPN9P43378 593 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 GLRBP48167 497 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 RPS6P62753 249 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 ZBTB17Q13105 803 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 OLIG2Q13516 323 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 AGKQ53H12 422 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 IRAK1BP1Q5VVH5 260 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 DPH6Q7L8W6 267 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 MCF2L2Q86YR7 1114 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 PDPRQ8NCN5 879 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 SHCBP1Q8NEM2 672 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 RDM1Q8NG50 284 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 HTR3CQ8WXA8 447 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 STON2Q8WXE9 905 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 SEPT8Q92599 483 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 MAELQ96JY0 434 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 QKIQ96PU8 341 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF670Q9BS34 389 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 CEP41Q9BYV8 373 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 GLIS2Q9BZE0 524 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 NDEL1Q9GZM8 345 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 GPN2Q9H9Y4 310 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 VTA1Q9NP79 307 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 OAZ3Q9UMX2 235 aa10.77□□□□□ -0.69
CCDC171-208ENST00000486641 AHDC1Q5TGY3 1603 aaPredicted RBP10.77□□□□□ -0.69
CCDC171-208ENST00000486641 SEC14L2O76054 403 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 HLCSP50747 726 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 MPP1Q00013 466 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 IFITM3Q01628 133 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SELENBP1Q13228 472 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 BFSP2Q13515 415 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ATP6AP1Q15904 470 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PGS1Q32NB8 556 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SPANXN3Q5MJ09 141 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SAMD4BQ5PRF9 694 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 AGAP7PQ5VUJ5 663 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PIGZQ86VD9 579 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SPPL2CQ8IUH8 684 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CMTR2Q8IYT2 770 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 NETO2Q8NC67 525 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ZC3H15Q8WU90 426 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 RMDN3Q96TC7 470 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 LGMNQ99538 433 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PDCD2LQ9BRP1 358 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 NAT9Q9BTE0 207 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 MRIQ9BWK5 157 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CD320Q9NPF0 282 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 AGPAT4Q9NRZ5 378 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 IFT80Q9P2H3 777 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 A0A0A0MRY4 1105 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CLDN25C9JDP6 229 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CABYRO75952 493 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PSAPP07602 524 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SAT1P21673 171 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CAPGP40121 348 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 NAMPTP43490 491 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SLC7A2P52569 658 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 RAD23AP54725 363 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PTPN11Q06124 597 aaPredicted RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 DNASE1L3Q13609 305 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 FASTKQ14296 549 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 INAVAQ3KP66 663 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 CYBRD1Q53TN4 286 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PIWIL3Q7Z3Z3 882 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 DSG4Q86SJ6 1040 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 DHRSXQ8N5I4 330 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ANKRD52Q8NB46 1076 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SPPL2BQ8TCT7 592 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SCYL1Q96KG9 808 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SPATA13Q96N96 652 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 TSPAN18Q96SJ8 248 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 C9orf16Q9BUW7 83 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 C1QTNF1Q9BXJ1 281 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SEZ6LQ9BYH1 1024 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 LHPPQ9H008 270 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PORCNQ9H237 461 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 RAD21L1Q9H4I0 556 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 SMARCAD1Q9H4L7 1026 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 PKD2L2Q9NZM6 624 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 ANKMY1Q9P2S6 941 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 KLHL3Q9UH77 587 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms