RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TBC1D3IA0A087WXS9 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3EA0A087X179 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3KA0A087X1G2 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 A0A0A6YYK5 440 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3FA6NER0 549 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 C10orf142B7Z368 130 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3LB9A6J9 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 BCAT2O15382 392 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 POP4O95707 220 aaKnown RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3HP0C7X1 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 CD27P26842 260 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 GKP32189 559 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 CCR5P51681 352 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 NEK3P51956 506 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 LIMK1P53667 647 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 CYTH1Q15438 398 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 MYLK3Q32MK0 819 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 ANKRD20A8PQ5CZ79 823 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 LRRC38Q5VT99 294 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3GQ6DHY5 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3CQ6IPX1 549 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TMEM139Q8IV31 216 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TP53INP2Q8IXH6 220 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3Q8IZP1 549 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-207ENST00000486572 C1orf216Q8TAB5 229 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 RMDN1Q96DB5 314 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 OSBPL1AQ9BXW6 950 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TFR2Q9UP52 801 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 SPOPO43791 374 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 BUB1BO60566 1050 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-207ENST00000486572 PALMO75781 387 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 ENGP17813 658 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 ID4P47928 161 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 TAS2R38P59533 333 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 PPP2CBP62714 309 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 PPP2CAP67775 309 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 RAD51Q06609 339 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 RFTN1Q14699 578 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-207ENST00000486572 NCBP2-AS2Q69YL0 99 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 RHOT1Q8IXI2 618 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 ATPAF2Q8N5M1 289 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 PCDH19Q8TAB3 1148 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 RAPGEF5Q92565 580 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 FAF2Q96CS3 445 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 EXOC2Q96KP1 924 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 ZNF599Q96NL3 588 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 CINPQ9BW66 212 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-207ENST00000486572 PREBQ9HCU5 417 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 DLL3Q9NYJ7 618 aa18.47■□□□□ 0.55
COL1A1-207ENST00000486572 A0A1W2PPC4 97 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 LRRD1A4D1F6 860 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 SLC30A4O14863 429 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 MFSD11O43934 449 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 UGT2B4P06133 528 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 ADRB3P13945 408 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 COMTP21964 271 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 KDELR1P24390 212 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 AFF3P51826 1226 aaKnown RBP18.46■□□□□ 0.55
COL1A1-207ENST00000486572 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
COL1A1-207ENST00000486572 ZNF805Q5CZA5 627 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 TMCO4Q5TGY1 634 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 STPG1Q5TH74 334 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 FBXL19Q6PCT2 694 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 PARS2Q7L3T8 475 aaKnown RBP18.46■□□□□ 0.55
COL1A1-207ENST00000486572 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 VOPP1Q96AW1 172 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 ORAI3Q9BRQ5 295 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 TM9SF3Q9HD45 589 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 TMEM9BQ9NQ34 198 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 FSCN3Q9NQT6 498 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 REXO2Q9Y3B8 237 aaKnown RBP18.46■□□□□ 0.55
COL1A1-207ENST00000486572 HYOU1Q9Y4L1 999 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 SLCO1B1Q9Y6L6 691 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 SPTBN4Q9H254 2564 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 PCDH15Q96QU1 1955 aa18.46■□□□□ 0.55
COL1A1-207ENST00000486572 RCCD1A6NED2 376 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 ZNF487B1APH4 448 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 ARHGAP33O14559 1287 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 LATO43561 262 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 MAFKO60675 156 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 KRT1P04264 644 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 SYPP08247 313 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 GSDMDP57764 484 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 PUM1Q14671 1186 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL1A1-207ENST00000486572 C11orf63Q6NUN7 778 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 NEK5Q6P3R8 708 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 GDPD4Q6W3E5 623 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 VSIG1Q86XK7 387 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 LRRC49Q8IUZ0 686 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 TSEN2Q8NCE0 465 aaKnown RBP18.45■□□□□ 0.54
COL1A1-207ENST00000486572 ACRBPQ8NEB7 543 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 KLHL32Q96NJ5 620 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 RTKNQ9BST9 563 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 CPEB1Q9BZB8 566 aaKnown RBP18.45■□□□□ 0.54
COL1A1-207ENST00000486572 DDX56Q9NY93 547 aaKnown RBP18.45■□□□□ 0.54
COL1A1-207ENST00000486572 SEPT3Q9UH03 358 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 ALG6Q9Y672 507 aa18.45■□□□□ 0.54
COL1A1-207ENST00000486572 C16orf96A6NNT2 1141 aa18.44■□□□□ 0.54
COL1A1-207ENST00000486572 CDX4O14627 284 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms