RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MAXP61244 160 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 SPOUT1Q5T280 376 aaKnown RBP20.61■□□□□ 0.89
HPS3-206ENST00000486530 TMCO4Q5TGY1 634 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 CLNKQ7Z7G1 428 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 SKA1Q96BD8 255 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 PLD4Q96BZ4 506 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 MYEOVQ96EZ4 313 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 ATXN3LQ9H3M9 355 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 SAR1AQ9NR31 198 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 COPG2Q9UBF2 871 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 HEY2Q9UBP5 337 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 ANKRD6Q9Y2G4 727 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 PRAMEF11O60813 436 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SEC24AO95486 1093 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SERPINE1P05121 402 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 MMP2P08253 660 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 MYL2P10916 166 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 HNRNPH1P31943 449 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 CHRNA4P43681 627 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ABCG1P45844 678 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 POLD2P49005 469 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SERPINH1P50454 418 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 ELF3P78545 371 aaPredicted RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 DSG1Q02413 1049 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 DSC2Q02487 901 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SEPT6Q14141 434 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 LBRQ14739 615 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 GRM3Q14832 879 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ZCCHC23Q6ZST2 131 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 KDELC2Q7Z4H8 507 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ARID3BQ8IVW6 561 aaPredicted RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 TADA1Q96BN2 335 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ZNF558Q96NG5 402 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 FAM167BQ9BTA0 163 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 CAB39LQ9H9S4 337 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 RC3H2Q9HBD1 1191 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 PCDH10Q9P2E7 1040 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 HNRNPCL1O60812 293 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 C2P06681 752 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 F7P08709 466 aaPredicted RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 HMGA1P17096 107 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 KCNA4P22459 653 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 GRK2P25098 689 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ARNTP27540 789 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ACVRL1P37023 503 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 CSRP3P50461 194 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 KCNJ2P63252 427 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 THOC5Q13769 683 aaKnown RBP20.6■□□□□ 0.89
HPS3-206ENST00000486530 RABGAP1LQ5R372 815 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 LCA5Q86VQ0 697 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SLC25A41Q8N5S1 370 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 TMEM169Q96HH4 297 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 MYRFLQ96LU7 910 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ZNF599Q96NL3 588 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SIKE1Q9BRV8 207 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 HERC2P3Q9BVR0 1158 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 LRMDAQ9H2I8 198 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 TRPM5Q9NZQ8 1165 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 SLC39A10Q9ULF5 831 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 ANAPC1Q9H1A4 1944 aa20.6■□□□□ 0.89
HPS3-206ENST00000486530 COCHO43405 550 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 MGRN1O60291 552 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 GJB5O95377 273 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 RAG1P15918 1043 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 TARSP26639 723 aaKnown RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 SLC6A4P31645 630 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 RASSF2P50749 326 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 WDR5P61964 334 aaKnown RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 ZBTB16Q05516 673 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 CNGA3Q16281 694 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 FAM117BQ6P1L5 589 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 C10orf107Q8IVU9 208 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 SLC39A11Q8N1S5 342 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 PLD6Q8N2A8 252 aaKnown RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 PGBD5Q8N414 524 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 GABPB2Q8TAK5 448 aaPredicted RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 ARRDC2Q8TBH0 407 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 INPP5DQ92835 1189 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 TRMT2BQ96GJ1 504 aaKnown RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 POLR1EQ9GZS1 481 aaKnown RBP20.59■□□□□ 0.89
HPS3-206ENST00000486530 MAGEH1Q9H213 219 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 PDFQ9HBH1 243 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 SLC2A6Q9UGQ3 507 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 MID2Q9UJV3 735 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 YIPF1Q9Y548 306 aa20.59■□□□□ 0.89
HPS3-206ENST00000486530 HAUS5O94927 633 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 PAPSS2O95340 614 aaPredicted RBP20.58■□□□□ 0.89
HPS3-206ENST00000486530 ACRP10323 421 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 CPA3P15088 417 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 SERPINB3P29508 390 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 ALDH1A3P47895 512 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 CDH4P55283 916 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 ZNF235Q14590 738 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 DLG2Q15700 870 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 PARP9Q8IXQ6 854 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 TUBB6Q9BUF5 446 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 C20orf27Q9GZN8 174 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 WWP1Q9H0M0 922 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 CYP4F11Q9HBI6 524 aa20.58■□□□□ 0.89
HPS3-206ENST00000486530 ZNF358Q9NW07 568 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms