RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 FATE1Q969F0 183 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 MYEOVQ96EZ4 313 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 IFT43Q96FT9 208 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
UBR4-214ENST00000486515 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 SPATA13Q96N96 652 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 AGAP3Q96P47 875 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 ACE2Q9BYF1 805 aaPredicted RBP7.07□□□□□ -1.28
UBR4-214ENST00000486515 CEP44Q9C0F1 390 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 L2HGDHQ9H9P8 463 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 PCDH9Q9HC56 1237 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 NT5MQ9NPB1 228 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 SCUBE2Q9NQ36 999 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 RAB6BQ9NRW1 208 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 NDFIP2Q9NV92 336 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 PCYOX1Q9UHG3 505 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 VPS51Q9UID3 782 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 FBXO10Q9UK96 956 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 ERVW-1Q9UQF0 538 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 R3HDM2Q9Y2K5 976 aaKnown RBP7.07□□□□□ -1.28
UBR4-214ENST00000486515 MFHAS1Q9Y4C4 1052 aa7.07□□□□□ -1.28
UBR4-214ENST00000486515 COL4A3Q01955 1670 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 IGF2RP11717 2491 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 MTCL1Q9Y4B5 1905 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 A0A1W2PQ67 120 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 C5orf60A6NFR6 353 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 SRRM3A6NNA2 597 aaPredicted RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 GFRA2O00451 464 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 RIOK3O14730 519 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 SNAP91O60641 907 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 GCATO75600 419 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 TMCC1O94876 653 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 EPHX1P07099 455 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 RHOXF2BP0C7M4 288 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 SLC6A11P48066 632 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 VPS41P49754 854 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 NUMBP49757 651 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 SCNN1BP51168 640 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 CLCN5P51795 746 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 SEC13P55735 322 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 IFI35P80217 286 aaPredicted RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 CAV1Q03135 178 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 BCL2L1Q07817 233 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 GPS1Q13098 491 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 HLTFQ14527 1009 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR4-214ENST00000486515 UBXN2BQ14CS0 331 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 PON2Q15165 354 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 OASLQ15646 514 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 DLG2Q15700 870 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 GEN1Q17RS7 908 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 FUT11Q495W5 492 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 RALGPS1Q5JS13 557 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 DGKKQ5KSL6 1271 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ANKRD20A2Q5SQ80 823 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ANKRD20A1Q5TYW2 823 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ANKRD20A3Q5VUR7 823 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 AFMIDQ63HM1 303 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 POTEHQ6S545 545 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 UNQ6494/PRO21346Q6UXR6 183 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 LINGO4Q6UY18 593 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 LEKR1Q6ZMV7 388 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 LINC00523Q86TU6 105 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 JAMLQ86YT9 394 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ETFBKMTQ8IXQ9 262 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR4-214ENST00000486515 DNAAF3Q8N9W5 541 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 KDM1BQ8NB78 822 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 NETO2Q8NC67 525 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 WFDC5Q8TCV5 224 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 TTC17Q96AE7 1141 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ISG20Q96AZ6 181 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 SNF8Q96H20 258 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 PPP1R16AQ96I34 528 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 RHOXF2Q9BQY4 288 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ADGRE3Q9BY15 652 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 TRIM31Q9BZY9 425 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 TSPYL1Q9H0U9 437 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ATP13A3Q9H7F0 1226 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 ARHGEF3Q9NR81 526 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 FAM114A2Q9NRY5 505 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 MTRF1LQ9UGC7 380 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 FAM153AQ9UHL3 310 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 CA14Q9ULX7 337 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 NDRG2Q9UN36 371 aaKnown RBP7.06□□□□□ -1.28
UBR4-214ENST00000486515 NEU3Q9UQ49 428 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 DOCK6Q96HP0 2047 aa7.06□□□□□ -1.28
UBR4-214ENST00000486515 EDDM13A0A1B0GTR0 161 aa7.05□□□□□ -1.28
UBR4-214ENST00000486515 TARSL2A2RTX5 802 aaKnown RBP7.05□□□□□ -1.28
UBR4-214ENST00000486515 EIF4E1BA6NMX2 242 aaKnown RBP7.05□□□□□ -1.28
UBR4-214ENST00000486515 ERI2A8K979 691 aaKnown RBP7.05□□□□□ -1.28
UBR4-214ENST00000486515 C1QTNF3-AMACRE9PGA6 284 aa7.05□□□□□ -1.28
UBR4-214ENST00000486515 ARNTLO00327 626 aa7.05□□□□□ -1.28
UBR4-214ENST00000486515 PDE2AO00408 941 aaPredicted RBP7.05□□□□□ -1.28
UBR4-214ENST00000486515 FANCGO15287 622 aa7.05□□□□□ -1.28
UBR4-214ENST00000486515 INSIG1O15503 277 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms