RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 GCNT1Q02742 428 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 CNTN1Q12860 1018 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 CUL2Q13617 745 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 SGSM1Q2NKQ1 1148 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ASTE1Q2TB18 679 aaPredicted RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 TPRG1LQ5T0D9 272 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 PIK3R6Q5UE93 754 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 OR6B2Q6IFH4 312 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ZCCHC8Q6NZY4 707 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 FBXO39Q8N4B4 442 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 UBR7Q8N806 425 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 SHC3Q92529 594 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 CYFIP2Q96F07 1278 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 PPP1R13BQ96KQ4 1090 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 FOXP3Q9BZS1 431 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 ZNF768Q9H5H4 540 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 SYNDIG1Q9H7V2 258 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 NHEJ1Q9H9Q4 299 aaPredicted RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 EPB41L5Q9HCM4 733 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 PNPLA8Q9NP80 782 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 DNAJC28Q9NX36 388 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 FOXJ2Q9P0K8 574 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
SND1-213ENST00000486037 TPX2Q9ULW0 747 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 EPN1Q9Y6I3 576 aaPredicted RBP10.07□□□□□ -0.8
SND1-213ENST00000486037 PRAMEF33A0A0G2JMD5 474 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 A0A0U1RQJ8 604 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 TARSL2A2RTX5 802 aaKnown RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 NTN3O00634 580 aaPredicted RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 PRAMEF10O60809 474 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 RNGTTO60942 597 aaKnown RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 NDUFA10O95299 355 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ITIH1P19827 911 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ASPAP45381 313 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 CD97P48960 835 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 YWHAGP61981 247 aaKnown RBP eCLIP10.06□□□□□ -0.8
SND1-213ENST00000486037 KLHL30Q0D2K2 578 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 SETMARQ53H47 684 aaPredicted RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 PITRM1Q5JRX3 1037 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ADGRF1Q5T601 910 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 PPP1R26Q5T8A7 1209 aaPredicted RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 NADSYN1Q6IA69 706 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 RSRC2Q7L4I2 434 aaKnown RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 ENOSF1Q7L5Y1 443 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 RAB11FIP2Q7L804 512 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ZNF571Q7Z3V5 609 aaPredicted RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 MFN1Q8IWA4 741 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 SLC35F3Q8IY50 421 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 FAM71AQ8IYT1 594 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 APCDD1Q8J025 514 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 JPH3Q8WXH2 748 aaPredicted RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 CDK5RAP1Q96SZ6 601 aaKnown RBP10.06□□□□□ -0.8
SND1-213ENST00000486037 CCDC3Q9BQI4 270 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 SYT11Q9BT88 431 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 DUSP23Q9BVJ7 150 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 SLC12A9Q9BXP2 914 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ADNPQ9H2P0 1102 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 HAUS4Q9H6D7 363 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 SPTLC3Q9NUV7 552 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 PISDQ9UG56 409 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ANAPC2Q9UJX6 822 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
SND1-213ENST00000486037 A0A1W2PQU0 124 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 RNF103O00237 685 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TULP2O00295 520 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 ZNF500O60304 480 aaPredicted RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 LCA5LO95447 670 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 ASLP04424 464 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TNFRSF8P28908 595 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 CLCN1P35523 988 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 CYLC1P35663 651 aaPredicted RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 RPS24P62847 133 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 PTK2Q05397 1052 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 FZD2Q14332 565 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 NR0B2Q15466 257 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 ZNF284Q2VY69 593 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TDRD12Q587J7 1177 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 DTX1Q86Y01 620 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 FIBINQ8TAL6 211 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 EDEM1Q92611 657 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TAF4BQ92750 862 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 BMFQ96LC9 184 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 FAM81BQ96LP2 452 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 CCDC42Q96M95 316 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 DUSP16Q9BY84 665 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 IMPG2Q9BZV3 1241 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TCEAL2Q9H3H9 227 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms