RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NNMTP40261 264 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 EIF2DP41214 584 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 GRIA2P42262 883 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SCTRP47872 440 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 NDST2P52849 883 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 YBEYP58557 167 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 EIF3EP60228 445 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ST8SIA6P61647 398 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ETF1P62495 437 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ECT2LQ008S8 904 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 OTUD4Q01804 1114 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ITKQ08881 620 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SIGLEC14Q08ET2 396 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 PAFAH1B3Q15102 231 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 PPP2R5EQ16537 467 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 KCTD19Q17RG1 926 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 TMEM196Q5HYL7 178 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 EGFLAMQ63HQ2 1017 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TMEM215Q68D42 235 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SLC9A4Q6AI14 798 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 C8orf86Q6ZUL3 223 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 BBS12Q6ZW61 710 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SLC13A5Q86YT5 568 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ARHGAP12Q8IWW6 846 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 CHPFQ8IZ52 775 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 UMODL1-AS1Q8N2C9 162 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 RYBPQ8N488 228 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ATPAF2Q8N5M1 289 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 PAF1Q8N7H5 531 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 PLD5Q8N7P1 536 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ZNF513Q8N8E2 541 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ZNF557Q8N988 423 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 PRSS33Q8NF86 280 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 RPLP0P6Q8NHW5 317 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 FAM71BQ8TC56 605 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 WFIKKN2Q8TEU8 576 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 COG1Q8WTW3 980 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 NSMCE1Q8WV22 266 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 C1orf54Q8WWF1 131 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ATG4AQ8WYN0 398 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 EDAQ92838 391 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 FAF2Q96CS3 445 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 PBKQ96KB5 322 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ACOX2Q99424 681 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 FEM1AQ9BSK4 669 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 C2orf49Q9BVC5 232 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 AP1M1Q9BXS5 423 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 CEP41Q9BYV8 373 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 MAGEH1Q9H213 219 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 CARD9Q9H257 536 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TNKS2Q9H2K2 1166 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 MTG2Q9H4K7 406 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 NOL6Q9H6R4 1146 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 LRRC19Q9H756 370 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 LTB4R2Q9NPC1 389 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TRPV5Q9NQA5 729 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 KCND1Q9NSA2 647 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 C2orf42Q9NWW7 574 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ELOVL2Q9NXB9 296 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 CACNA2D2Q9NY47 1150 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 DONSONQ9NYP3 566 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 UBA2Q9UBT2 640 aaPredicted RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 ZNF212Q9UDV6 495 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 IPO11Q9UI26 975 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 VPS51Q9UID3 782 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SLCO3A1Q9UIG8 710 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 FBXO10Q9UK96 956 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SNX12Q9UMY4 172 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 PLA2G4CQ9UP65 541 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 ERVW-1Q9UQF0 538 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 TBC1D30Q9Y2I9 924 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 R3HDM2Q9Y2K5 976 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 MRPS17Q9Y2R5 130 aaKnown RBP5.74□□□□□ -1.49
COPS3-208ENST00000486032 RAD54BQ9Y620 910 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SAR1BQ9Y6B6 198 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 DOCK4Q8N1I0 1966 aa5.74□□□□□ -1.49
COPS3-208ENST00000486032 SHROOM3Q8TF72 1996 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 TTC34A8MYJ7 566 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 APOC4-APOC2K7ER74 178 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 PGRMC1O00264 195 aaKnown RBP5.73□□□□□ -1.49
COPS3-208ENST00000486032 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
COPS3-208ENST00000486032 FANCGO15287 622 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 KDELR3O43731 214 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 MT-CO1P00395 513 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 APOC2P02655 101 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 ASLP04424 464 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 EPHX1P07099 455 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 DLDP09622 509 aaKnown RBP5.73□□□□□ -1.49
COPS3-208ENST00000486032 CHRNB1P11230 501 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 VAV1P15498 845 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 TCP1P17987 556 aaKnown RBP5.73□□□□□ -1.49
COPS3-208ENST00000486032 TGM2P21980 687 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 RBL1P28749 1068 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 GARSP41250 739 aaKnown RBP5.73□□□□□ -1.49
COPS3-208ENST00000486032 IL12RB1P42701 662 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 PAFAH1B1P43034 410 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 TNFRSF4P43489 277 aa5.73□□□□□ -1.49
COPS3-208ENST00000486032 TERF1P54274 439 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms