RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 DRD3P35462 400 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 PLA2G5P39877 138 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 CETN2P41208 172 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 MMP13P45452 471 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 RGRP47804 291 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 PEX5P50542 639 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 RAD51Q06609 339 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 CCDC173Q0VFZ6 552 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 CNTN1Q12860 1018 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ZNF211Q13398 564 aaPredicted RBP12.02□□□□□ -0.49
HPS4-214ENST00000485842 RFTN1Q14699 578 aaPredicted RBP12.02□□□□□ -0.49
HPS4-214ENST00000485842 PPP2R5EQ16537 467 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 TAZQ16635 292 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 MYLK3Q32MK0 819 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 AADACL2Q6P093 401 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
HPS4-214ENST00000485842 ZNF662Q6ZS27 426 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ASCL5Q7RTU5 278 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 BBS5Q8N3I7 341 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 TSEN2Q8NCE0 465 aaKnown RBP12.02□□□□□ -0.49
HPS4-214ENST00000485842 TMIEQ8NEW7 156 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 PPP1R16AQ96I34 528 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ZC3H10Q96K80 434 aaKnown RBP12.02□□□□□ -0.49
HPS4-214ENST00000485842 HSPA12BQ96MM6 686 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 BTBD1Q9H0C5 482 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 NEUROG2Q9H2A3 272 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 SEPT3Q9UH03 358 aa12.02□□□□□ -0.49
HPS4-214ENST00000485842 ANKRD36A6QL64 1941 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 MUSKO15146 869 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 INSIG1O15503 277 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 DDX3YO15523 660 aaKnown RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 NEBLO76041 1014 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 SEMA4FO95754 770 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PEX11BO96011 259 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 C7P10643 843 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PYGMP11217 842 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 TGM2P21980 687 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PTGER3P43115 390 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 RENBPP51606 427 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 COPS2P61201 443 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 CREB5Q02930 508 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PDK1Q15118 436 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 MARC1Q5VT66 337 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 LYSMD4Q5XG99 296 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 TIGD7Q6NT04 549 aaPredicted RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 BBS12Q6ZW61 710 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 B4GALNT4Q76KP1 1039 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 CYP2U1Q7Z449 544 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 LRRC49Q8IUZ0 686 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 CCDC13Q8IYE1 715 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 PAF1Q8N7H5 531 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 OR14C36Q8NHC7 312 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 SNX19Q92543 992 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 HDAC11Q96DB2 347 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 KLHL32Q96NJ5 620 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 LGMNQ99538 433 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 OSBPL8Q9BZF1 889 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 SGK2Q9HBY8 427 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 NT5MQ9NPB1 228 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 SEPT10Q9P0V9 454 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 SAE1Q9UBE0 346 aaPredicted RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 FZD4Q9ULV1 537 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 TTLL3Q9Y4R7 772 aa12.01□□□□□ -0.49
HPS4-214ENST00000485842 ATXN2Q99700 1313 aaKnown RBP12.01□□□□□ -0.49
HPS4-214ENST00000485842 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 TTC24A2A3L6 582 aaPredicted RBP12□□□□□ -0.49
HPS4-214ENST00000485842 PPP1R12AO14974 1030 aaPredicted RBP12□□□□□ -0.49
HPS4-214ENST00000485842 MATN3O15232 486 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ZSCAN12O43309 604 aa12□□□□□ -0.49
HPS4-214ENST00000485842 GFRA3O60609 400 aa12□□□□□ -0.49
HPS4-214ENST00000485842 GJB3O75712 270 aa12□□□□□ -0.49
HPS4-214ENST00000485842 EPN2O95208 641 aa12□□□□□ -0.49
HPS4-214ENST00000485842 PIGNO95427 931 aa12□□□□□ -0.49
HPS4-214ENST00000485842 CCNCP24863 283 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ITGB7P26010 798 aa12□□□□□ -0.49
HPS4-214ENST00000485842 HSPA9P38646 679 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 SCNN1BP51168 640 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ADPRHP54922 357 aa12□□□□□ -0.49
HPS4-214ENST00000485842 MAXP61244 160 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ZNF33AQ06730 810 aa12□□□□□ -0.49
HPS4-214ENST00000485842 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 AP1B1Q10567 949 aa12□□□□□ -0.49
HPS4-214ENST00000485842 PIP5KL1Q5T9C9 394 aa12□□□□□ -0.49
HPS4-214ENST00000485842 AGBL4Q5VU57 503 aa12□□□□□ -0.49
HPS4-214ENST00000485842 DCAF12L1Q5VU92 463 aa12□□□□□ -0.49
HPS4-214ENST00000485842 GDPD4Q6W3E5 623 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ERN2Q76MJ5 926 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 PARS2Q7L3T8 475 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 SRLQ86TD4 932 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ZC3H18Q86VM9 953 aaKnown RBP12□□□□□ -0.49
HPS4-214ENST00000485842 SLC41A1Q8IVJ1 513 aa12□□□□□ -0.49
HPS4-214ENST00000485842 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
HPS4-214ENST00000485842 TRIM58Q8NG06 486 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms