RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 APOLD1Q96LR9 279 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TMEM245Q9H330 911 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 CAAP1Q9H8G2 361 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 GCM1Q9NP62 436 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PRSS16Q9NQE7 514 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 AP5S1Q9NUS5 200 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 LARSQ9P2J5 1176 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 ANAPC2Q9UJX6 822 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 AGO2Q9UKV8 859 aaKnown RBP5.56□□□□□ -1.52
PTPN4-210ENST00000485247 PLA2G4CQ9UP65 541 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 MYH10P35580 1976 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 POLQO75417 2590 aa5.56□□□□□ -1.52
PTPN4-210ENST00000485247 TCAF2A6NFQ2 919 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 MDM4O15151 490 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 MTSS1O43312 755 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 TIMM44O43615 452 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 RNASEH2AO75792 299 aaKnown RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 IL18RAPO95256 599 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ITGA2BP08514 1039 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ZDHHC11BP0C7U3 371 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 RNF224P0DH78 156 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 GIMD1P0DJR0 217 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 WT1P19544 449 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ATP5C1P36542 298 aaKnown RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 GNL1P36915 607 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 DCTP40126 519 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 UQCRFS1P47985 274 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SLC5A3P53794 718 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 RBP5P82980 135 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 KCNAB2Q13303 367 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SLC14A2Q15849 920 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ADGRF1Q5T601 910 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 FHL5Q5TD97 284 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 KRT79Q5XKE5 535 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 CRELD2Q6UXH1 353 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 RBM44Q6ZP01 1051 aaKnown RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 USP30Q70CQ3 517 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 RUFY3Q7L099 469 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 NT5DC4Q86YG4 428 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 OR2T34Q8NGX1 318 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 CXorf38Q8TB03 319 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SSC4DQ8WTU2 575 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 CACTINQ8WUQ7 758 aaKnown RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 WASF1Q92558 559 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 GOLGA1Q92805 767 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 KCNN1Q92952 543 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 MIB2Q96AX9 1013 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 PLIN2Q99541 437 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 OMDQ99983 421 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 FUCA2Q9BTY2 467 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 CDADC1Q9BWV3 514 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SLC12A9Q9BXP2 914 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 B3GNT5Q9BYG0 378 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ELOVL4Q9GZR5 314 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 NEUROG2Q9H2A3 272 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ADNPQ9H2P0 1102 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 IKZF4Q9H2S9 585 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 PABPC3Q9H361 631 aaKnown RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 DPEP3Q9H4B8 488 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 MTG2Q9H4K7 406 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 GP6Q9HCN6 339 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF71Q9NQZ8 489 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-210ENST00000485247 TNFRSF10DQ9UBN6 386 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 SIX4Q9UIU6 781 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 NUDT5Q9UKK9 219 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 NME7Q9Y5B8 376 aa5.55□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3DA0A087WVF3 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3IA0A087WXS9 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3EA0A087X179 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3KA0A087X1G2 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CCDC187A0A096LP49 1063 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 LY6G6EA0A0G2JKS1 128 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CPED1A4D0V7 1026 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3FA6NER0 549 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3LB9A6J9 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CASC3O15234 703 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MID1O15344 667 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CBFA2T2O43439 604 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 SEMA7AO75326 666 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CTDNEP1O95476 244 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 KLKB1P03952 638 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TP53P04637 393 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 GSNP06396 782 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 KRT7P08729 469 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3HP0C7X1 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 FDPSP14324 419 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 WARSP23381 471 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MAT2AP31153 395 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CHKAP35790 457 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TRAPPC10P48553 1259 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CCR5P51681 352 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 POLE2P56282 527 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 LINC00310P59036 64 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF445P59923 1031 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 PPP2CBP62714 309 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 PPP2CAP67775 309 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms