RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 PRR23D2P0DMB1 279 aaPredicted RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 BMP2P12643 396 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 AKAP5P24588 427 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 PTX3P26022 381 aaPredicted RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 MDH1P40925 334 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 GSTM5P46439 218 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 SERPINB9P50453 376 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 SCAND1P57086 179 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 PTK2Q05397 1052 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 DGKDQ16760 1214 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 ANKRD20A4Q4UJ75 823 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 MPP7Q5T2T1 576 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 FAM109BQ6ICB4 259 aaPredicted RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 FOXR1Q6PIV2 292 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 PRR23CQ6ZRP0 262 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 OTOAQ7RTW8 1153 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 FAM122BQ7Z309 247 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 MIER3Q7Z3K6 550 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 HEATR3Q7Z4Q2 680 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 MOGAT3Q86VF5 341 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 ZFPM1Q8IX07 1006 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 TAGAPQ8N103 731 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 ELMOD1Q8N336 334 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 RASGEF1CQ8N431 466 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 ZNF781Q8N8C0 355 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 EIF1ADQ8N9N8 165 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 TSEN2Q8NCE0 465 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 CPT1BQ92523 772 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 FAM120BQ96EK7 910 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 SIPA1Q96FS4 1042 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 P2RX7Q99572 595 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 ANKRD2Q9GZV1 360 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 TMEM60Q9H2L4 133 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 EXO5Q9H790 373 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 MRPL47Q9HD33 250 aaKnown RBP8.3□□□□□ -1.08
CAST-210ENST00000484552 ERVK-5Q9HDB9 667 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 NARFQ9UHQ1 456 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 POLIQ9UNA4 740 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 CCL27Q9Y4X3 112 aa8.3□□□□□ -1.08
CAST-210ENST00000484552 PCDH11XQ9BZA7 1347 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 PCDH11YQ9BZA8 1340 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 RGPD8O14715 1765 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 MYO1FO00160 1098 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 ACKR2O00590 384 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 DCLK1O15075 740 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
CAST-210ENST00000484552 DENRO43583 198 aaKnown RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 TRIM3O75382 744 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 RHBDL1O75783 438 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 RPP40O75818 363 aaKnown RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 PDE5AO76074 875 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 PLEKHA8P1O95397 391 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SPCS3P61009 180 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 PTPRRQ15256 657 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SMAD2Q15796 467 aaKnown RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 NPTX1Q15818 432 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 TXNRD1Q16881 649 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 FAM83EQ2M2I3 478 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 TYSND1Q2T9J0 566 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 ZNF829Q3KNS6 432 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 FAM69AQ5T7M9 428 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SLC9C2Q5TAH2 1124 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 USP17L6PQ6QN14 398 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 DPP8Q6V1X1 898 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 HTR3DQ70Z44 454 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 DCP1BQ8IZD4 617 aaKnown RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 UBA3Q8TBC4 463 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SLC20A1Q8WUM9 679 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 FBXO32Q969P5 355 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 LENG1Q96BZ8 264 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 PHACTR3Q96KR7 559 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 MRPL4Q9BYD3 311 aaKnown RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 HDHD2Q9H0R4 259 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 THAP2Q9H0W7 228 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 LRRC40Q9H9A6 602 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 CTNNAL1Q9UBT7 734 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 TMPRSS11EQ9UL52 423 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.29□□□□□ -1.08
CAST-210ENST00000484552 USP18Q9UMW8 372 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SNX7Q9UNH6 387 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 COL3A1P02461 1466 aaPredicted RBP8.29□□□□□ -1.08
CAST-210ENST00000484552 FAM205AQ6ZU69 1335 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
CAST-210ENST00000484552 ANKRD26Q9UPS8 1709 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 SYCE3A1L190 88 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 RHPN2P1A8MT19 583 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 ZNF263O14978 683 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 PRDM1O75626 825 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 TUSC2O75896 110 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 CCNB2O95067 398 aa8.28□□□□□ -1.08
CAST-210ENST00000484552 MFN2O95140 757 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms