RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PRICKLE1Q96MT3 831 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CSPG4P5Q96PW8 444 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 KCTD15Q96SI1 283 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 RBM15Q96T37 977 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TMEM109Q9BVC6 243 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CDC42EP4Q9H3Q1 356 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 SEMA4AQ9H3S1 761 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 ANLNQ9NQW6 1124 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TMPRSS4Q9NRS4 437 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 CACNA2D2Q9NY47 1150 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TBC1D14Q9P2M4 693 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 FBXO4Q9UKT5 387 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 SMG5Q9UPR3 1016 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 SNX10Q9Y5X0 201 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 NFS1Q9Y697 457 aa7.08□□□□□ -1.28
BRCA1-216ENST00000484087 TNRC6BQ9UPQ9 1833 aaKnown RBP7.08□□□□□ -1.28
BRCA1-216ENST00000484087 A0A087WUV0 522 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TLDC2A0PJX2 215 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TBC1D3BA6NDS4 549 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PROB1E7EW31 1015 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CREB3O43889 395 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CACNG3O60359 315 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 ACSL3O95573 720 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 AGTP01019 485 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 APODP05090 189 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 GOT1P17174 413 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 BCKDHBP21953 392 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 HOXD9P28356 352 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PHBP35232 272 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SERPINB6P35237 376 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 RPL22P35268 128 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 ADRA1BP35368 520 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CHKAP35790 457 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 MAGEA4P43358 317 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 MAGEA9P43362 315 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 KIR2DL1P43626 348 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 DGKGP49619 791 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 GYS2P54840 703 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TPI1P60174 286 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SARNPP82979 210 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SCAPQ12770 1279 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 NR1H3Q13133 447 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 STAT4Q14765 748 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PDK1Q15118 436 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TRIP4Q15650 581 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 KCTD19Q17RG1 926 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SKIDA1Q1XH10 827 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SLC45A4Q5BKX6 768 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 FAM133BQ5BKY9 247 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TTMPQ5BVD1 217 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 BRMS1LQ5PSV4 323 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TMEM215Q68D42 235 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 GRAMD4Q6IC98 578 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 KIAA1211LQ6NV74 962 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 KLHDC10Q6PID8 442 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 NPNTQ6UXI9 565 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TAOK1Q7L7X3 1001 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 BNIPLQ7Z465 357 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 UNC45BQ8IWX7 931 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 KIAA2013Q8IYS2 634 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PDIK1LQ8N165 341 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CFAP52Q8N1V2 620 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PQLC3Q8N755 202 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 ZNF513Q8N8E2 541 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 MDGA1Q8NFP4 955 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 DDI1Q8WTU0 396 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 TFB1MQ8WVM0 346 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 NELL1Q92832 810 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PGM2Q96G03 612 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 FCRL2Q96LA5 508 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CNOT10Q9H9A5 744 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PPCSQ9HAB8 311 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SAYSD1Q9NPB0 183 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 ZSCAN32Q9NX65 697 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CWC15Q9P013 229 aaKnown RBP7.07□□□□□ -1.28
BRCA1-216ENST00000484087 DEC1Q9P2X7 70 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SLC8A2Q9UPR5 921 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 ADAMTS9Q9P2N4 1935 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 NUP205Q92621 2012 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 SPTBN4Q9H254 2564 aa7.07□□□□□ -1.28
BRCA1-216ENST00000484087 CKAP5Q14008 2032 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 TCRBV21S2A2A0A5A6 115 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 E7EVH7 732 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 I6L893 689 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 IRAK2O43187 625 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 LILRB5O75023 590 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 PENKP01210 267 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 IGLV3-27P01718 113 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 LMNAP02545 664 aaKnown RBP7.06□□□□□ -1.28
BRCA1-216ENST00000484087 ABHD2P08910 425 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 CISD3P0C7P0 127 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 SLC2A3P11169 496 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 HLA-EP13747 358 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 TSHRP16473 764 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 MX2P20592 715 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 AMPD1P23109 780 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 RBL1P28749 1068 aa7.06□□□□□ -1.28
BRCA1-216ENST00000484087 CCR1P32246 355 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms