RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CCNL2Q96S94 520 aaPredicted RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 CCDC3Q9BQI4 270 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 MBNL1Q9NR56 388 aaKnown RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 TLN1Q9Y490 2541 aaKnown RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 MED7O43513 233 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 HSF2BPO75031 334 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 TCEA3O75764 348 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 HGFP14210 728 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 SLC9A1P19634 815 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 ITGB7P26010 798 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 SLC5A2P31639 672 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 NOS2P35228 1153 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 CLCN6P51797 869 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 SLC6A3Q01959 620 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 PTPN20Q4JDL3 420 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 CARD16Q5EG05 197 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 COLEC12Q5KU26 742 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 TRNP1Q6NT89 227 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 SETD3Q86TU7 594 aaPredicted RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 EXTL1Q92935 676 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 FUBP1Q96AE4 644 aaKnown RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 IL12RB2Q99665 862 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 HEPHQ9BQS7 1158 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 DYRK4Q9NR20 520 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 STARD5Q9NSY2 213 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 NDFIP2Q9NV92 336 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
UBR4-213ENST00000483922 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 UTP20O75691 2785 aaKnown RBP13.12□□□□□ -0.31
UBR4-213ENST00000483922 CCDC187A0A096LP49 1063 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 A0A1W2PQM1 296 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 FAM170AA1A519 330 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 C16orf96A6NNT2 1141 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 FPGTO14772 594 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 SUV39H1O43463 412 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 DAB1O75553 588 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 TSHRP16473 764 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 UGT1A5P35504 534 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 IGFALSP35858 605 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 SERPINH1P50454 418 aaKnown RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 MARSP56192 900 aaKnown RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 PRRT3Q5FWE3 981 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 KCTD16Q68DU8 428 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 C11orf57Q6ZUT1 292 aaPredicted RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 LURAP1LQ8IV03 231 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 PHACTR4Q8IZ21 702 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 OR6K2Q8NGY2 324 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 ASB12Q8WXK4 309 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 CCDC97Q96F63 343 aaPredicted RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 CRACR2AQ9BSW2 395 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 SPON2Q9BUD6 331 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 MAGEB5Q9BZ81 275 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 WDCPQ9H6R7 721 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 PLCB1Q9NQ66 1216 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 IPO11Q9UI26 975 aaKnown RBP13.11□□□□□ -0.31
UBR4-213ENST00000483922 PADI4Q9UM07 663 aa13.11□□□□□ -0.31
UBR4-213ENST00000483922 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 H3BM21 787 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 CLCN1P35523 988 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 DNA2P51530 1060 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 STX17P56962 302 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 CCL7P80098 99 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 CETN1Q12798 172 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 ARHGAP44Q17R89 818 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 LRRC73Q5JTD7 316 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 ZNF397Q8NF99 534 aaPredicted RBP13.1□□□□□ -0.31
UBR4-213ENST00000483922 SHC3Q92529 594 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 PGAP3Q96FM1 320 aaPredicted RBP13.1□□□□□ -0.31
UBR4-213ENST00000483922 LIN37Q96GY3 246 aaPredicted RBP13.1□□□□□ -0.31
UBR4-213ENST00000483922 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 TBCBQ99426 244 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 CEP44Q9C0F1 390 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 NCKIPSDQ9NZQ3 722 aa13.1□□□□□ -0.31
UBR4-213ENST00000483922 HECAQ9UBI9 543 aaPredicted RBP13.1□□□□□ -0.31
UBR4-213ENST00000483922 SPASTQ9UBP0 616 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms