RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 TMEM139Q8IV31 216 aa26.22■■□□□ 1.79
PDCD4-208ENST00000483670 ATPAF2Q8N5M1 289 aa26.22■■□□□ 1.79
PDCD4-208ENST00000483670 NSMCE1Q8WV22 266 aa26.22■■□□□ 1.79
PDCD4-208ENST00000483670 SNX19Q92543 992 aa26.22■■□□□ 1.79
PDCD4-208ENST00000483670 SMOC1Q9H4F8 434 aa26.22■■□□□ 1.79
PDCD4-208ENST00000483670 EIF2B4Q9UI10 523 aaKnown RBP26.22■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3DA0A087WVF3 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3IA0A087WXS9 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3EA0A087X179 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3KA0A087X1G2 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 LNP1A1A4G5 178 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3FA6NER0 549 aaPredicted RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3LB9A6J9 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 BCAT2O15382 392 aaPredicted RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 PSTPIP1O43586 416 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 BUB1BO60566 1050 aaPredicted RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 SYPP08247 313 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3HP0C7X1 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 COMTP21964 271 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 RENBPP51606 427 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 NEK3P51956 506 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 VAV2P52735 878 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 METAP1P53582 386 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 MMRN1Q13201 1228 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 CYTH1Q15438 398 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 POM121L1PQ3SYA9 428 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 PIP5KL1Q5T9C9 394 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3GQ6DHY5 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3CQ6IPX1 549 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 TBC1D3Q8IZP1 549 aaPredicted RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 BBS5Q8N3I7 341 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 PCDH19Q8TAB3 1148 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 RAB7BQ96AH8 199 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 CINPQ9BW66 212 aaPredicted RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 CPEB1Q9BZB8 566 aaKnown RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 MIR1-1HGQ9H1L0 117 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 CAPN10Q9HC96 672 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 LHX3Q9UBR4 397 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 CDV3Q9UKY7 258 aaKnown RBP26.21■■□□□ 1.79
PDCD4-208ENST00000483670 ALG6Q9Y672 507 aa26.21■■□□□ 1.79
PDCD4-208ENST00000483670 LRRD1A4D1F6 860 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 PATE3B3GLJ2 98 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 C10orf142B7Z368 130 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 IGHV4-34P06331 123 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 MAOBP27338 520 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 HSPA9P38646 679 aaKnown RBP26.2■■□□□ 1.78
PDCD4-208ENST00000483670 MAPK8P45983 427 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 CSNK1DP48730 415 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 IRX4P78413 519 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 NSUN2Q08J23 767 aaKnown RBP eCLIP26.2■■□□□ 1.78
PDCD4-208ENST00000483670 ZNF805Q5CZA5 627 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 TCEAL6Q6IPX3 200 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 FBXL19Q6PCT2 694 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 ZSCAN30Q86W11 494 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 TRIM69Q86WT6 500 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 TCEAL3Q969E4 200 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 ARRDC3Q96B67 414 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 EDEM2Q9BV94 578 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 ZDHHC5Q9C0B5 715 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 KLHL11Q9NVR0 708 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 SEPT3Q9UH03 358 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.2■■□□□ 1.78
PDCD4-208ENST00000483670 CACNA1EQ15878 2313 aa26.2■■□□□ 1.78
PDCD4-208ENST00000483670 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.19■■□□□ 1.78
PDCD4-208ENST00000483670 A0A1W2PPC4 97 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 PJA2O43164 708 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 AFF3P51826 1226 aaKnown RBP26.19■■□□□ 1.78
PDCD4-208ENST00000483670 ATXN7L2Q5T6C5 722 aaPredicted RBP26.19■■□□□ 1.78
PDCD4-208ENST00000483670 NCBP2-AS2Q69YL0 99 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 GDPD4Q6W3E5 623 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 KIAA1328Q86T90 577 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 ZCCHC9Q8N567 271 aaKnown RBP26.19■■□□□ 1.78
PDCD4-208ENST00000483670 OR6K2Q8NGY2 324 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 HCAR2Q8TDS4 363 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 RAPGEF5Q92565 580 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 RNF157Q96PX1 679 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 TUBGCP5Q96RT8 1024 aa26.19■■□□□ 1.78
PDCD4-208ENST00000483670 MAK16Q9BXY0 300 aaKnown RBP26.19■■□□□ 1.78
PDCD4-208ENST00000483670 CEP250Q9BV73 2442 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 LATO43561 262 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 MAFKO60675 156 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 ADRB3P13945 408 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 ZFXP17010 805 aaPredicted RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 MX2P20592 715 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 LBRQ14739 615 aaKnown RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 TEAD4Q15561 434 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 IFI16Q16666 785 aaKnown RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 TIGD7Q6NT04 549 aaPredicted RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 ARHGAP36Q6ZRI8 547 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 DAAM2Q86T65 1068 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 PRPF39Q86UA1 669 aaKnown RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 CCDC112Q8NEF3 446 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 TPCN2Q8NHX9 752 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 C1orf216Q8TAB5 229 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 PSKH2Q96QS6 385 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 HAUS2Q9NVX0 235 aa26.18■■□□□ 1.78
PDCD4-208ENST00000483670 REXO2Q9Y3B8 237 aaKnown RBP26.18■■□□□ 1.78
PDCD4-208ENST00000483670 PLK4O00444 970 aa26.17■■□□□ 1.78
PDCD4-208ENST00000483670 AP1G1O43747 822 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms