RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ITPKAP23677 461 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 GARSP41250 739 aaKnown RBP21.22■□□□□ 0.99
SEC13-217ENST00000482647 RENBPP51606 427 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 ADPRHP54922 357 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 GBE1Q04446 702 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 LBRQ14739 615 aaKnown RBP21.22■□□□□ 0.99
SEC13-217ENST00000482647 CSRP2Q16527 193 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 SLC9A4Q6AI14 798 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 MFSD7Q6UXD7 560 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 RFX6Q8HWS3 928 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 RGL4Q8IZJ4 473 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 OR2T34Q8NGX1 318 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 EXD1Q8NHP7 514 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 ZNF830Q96NB3 372 aaPredicted RBP21.22■□□□□ 0.99
SEC13-217ENST00000482647 KDM4CQ9H3R0 1056 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 C6orf106Q9H6K1 298 aaPredicted RBP21.22■□□□□ 0.99
SEC13-217ENST00000482647 SEMA4GQ9NTN9 838 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 PILRBQ9UKJ0 227 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 PCDHA3Q9Y5H8 950 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 FAM186AA6NE01 2351 aa21.22■□□□□ 0.99
SEC13-217ENST00000482647 PLK4O00444 970 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 KRT86O43790 486 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 FOXD2O60548 495 aaPredicted RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 CCDC175P0C221 793 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 ITGB7P26010 798 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 GKP32189 559 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 CTNNA1P35221 906 aaKnown RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 HOXD12P35452 270 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 CDKN2BP42772 138 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 CSNK1DP48730 415 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 CCZ1BP86790 482 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 CCZ1P86791 482 aaPredicted RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 NSUN2Q08J23 767 aaKnown RBP eCLIP21.21■□□□□ 0.99
SEC13-217ENST00000482647 SLC10A7Q0GE19 358 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 TFDP2Q14188 446 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 GRM3Q14832 879 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 TAZQ16635 292 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 PLA2G2CQ5R387 149 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 AGBL4Q5VU57 503 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 DCAF12L1Q5VU92 463 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 TIGD7Q6NT04 549 aaPredicted RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 NCEH1Q6PIU2 408 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 SPOCD1Q6ZMY3 1216 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 ERN2Q76MJ5 926 aaKnown RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 BBS5Q8N3I7 341 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 PLD5Q8N7P1 536 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 KRT35Q92764 455 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 ARRDC3Q96B67 414 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 RBM41Q96IZ5 413 aaKnown RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 EXOC2Q96KP1 924 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 PSKH2Q96QS6 385 aa21.21■□□□□ 0.99
SEC13-217ENST00000482647 EVLQ9UI08 416 aaPredicted RBP21.21■□□□□ 0.99
SEC13-217ENST00000482647 TBC1D3DA0A087WVF3 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3IA0A087WXS9 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3EA0A087X179 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3KA0A087X1G2 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CCDC66A2RUB6 948 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3FA6NER0 549 aaPredicted RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3LB9A6J9 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 RNF103O00237 685 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 PLRG1O43660 514 aaKnown RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 FSBPO95073 299 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 PEX11BO96011 259 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3HP0C7X1 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 ZNF806P0C7X5 589 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TGM1P22735 817 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CCNCP24863 283 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CTNNA2P26232 953 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 MARCKSL1P49006 195 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 ZNF235Q14590 738 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CCDC6Q16204 474 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 ZNF805Q5CZA5 627 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TFDP3Q5H9I0 405 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 MARC1Q5VT66 337 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 KIAA0895LQ68EN5 471 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3GQ6DHY5 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3CQ6IPX1 549 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 FBXL19Q6PCT2 694 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 GDPD4Q6W3E5 623 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 PEX26Q7Z412 305 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 RABEPKQ7Z6M1 372 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CCDC50Q8IVM0 306 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TBC1D3Q8IZP1 549 aaPredicted RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 CEP76Q8TAP6 659 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 DNASE2BQ8WZ79 361 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TSGA13Q96PP4 275 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 CPEB1Q9BZB8 566 aaKnown RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 TMEM74BQ9NUR3 256 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 DTLQ9NZJ0 730 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 AMFRQ9UKV5 643 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 TPX2Q9ULW0 747 aaKnown RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.2■□□□□ 0.98
SEC13-217ENST00000482647 HEY1Q9Y5J3 304 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 NUP205Q92621 2012 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 GVINP1Q7Z2Y8 2422 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 SPAG17Q6Q759 2223 aa21.2■□□□□ 0.98
SEC13-217ENST00000482647 PLXND1Q9Y4D7 1925 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 MAP3K6O95382 1288 aa21.19■□□□□ 0.98
SEC13-217ENST00000482647 UGT2B4P06133 528 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms