RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CLCN7P51798 805 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 NDST1P52848 882 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CLNS1AP54105 237 aaKnown RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 BCAT1P54687 386 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SLC6A3Q01959 620 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 OGDHQ02218 1023 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SLC20A2Q08357 652 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GPS1Q13098 491 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ZBTB6Q15916 424 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 KLHL38Q2WGJ6 581 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 C2CD6Q53TS8 623 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 XKR4Q5GH76 650 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 MARCH8Q5T0T0 291 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 FAM102AQ5T9C2 384 aaPredicted RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 RNASEH2BQ5TBB1 312 aaKnown RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 CYP4A22Q5TCH4 519 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 FYB2Q5VWT5 728 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 KAZNQ674X7 775 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 TAF2Q6P1X5 1199 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ABHD17CQ6PCB6 329 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ALKAL1Q6UXT8 129 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 DLK2Q6UY11 383 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PRR23BQ6ZRT6 265 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PHLDB2Q86SQ0 1253 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CPNE8Q86YQ8 564 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 LMNTD2Q8IXW0 634 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PDIK1LQ8N165 341 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CRYBG2Q8N1P7 616 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GBP7Q8N8V2 638 aaPredicted RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 ATP11CQ8NB49 1132 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CCDC197Q8NCU1 140 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.93□□□□□ -1.14
SNX13-208ENST00000482558 DYDC1Q8WWB3 177 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SOCS4Q8WXH5 440 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 ATP6V1E2Q96A05 226 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CPXM1Q96SM3 734 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SELENOSQ9BQE4 189 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 APOL5Q9BWW9 433 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 AP5M1Q9H0R1 490 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 SMYD3Q9H7B4 428 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 GDAP2Q9NXN4 497 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 B4GALT6Q9UBX8 382 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 TSPAN16Q9UKR8 245 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 PCDHA9Q9Y5H5 950 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 RALGAPA2Q2PPJ7 1873 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 MCM3APO60318 1980 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 EVPLQ92817 2033 aa7.93□□□□□ -1.14
SNX13-208ENST00000482558 CITO14578 2027 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 EXOC1LA0A1B0GW35 172 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CST8O60676 142 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 GPR32O75388 356 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 FSBPO95073 299 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 GJB1P08034 283 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SMIM10L2AP0DMW4 78 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SMIM10L2BP0DMW5 78 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CYP2C9P11712 490 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 KRT10P13645 584 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 GLULP15104 373 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 PEX2P28328 305 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 MIPP30301 263 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 HOXA11P31270 313 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 RGS2P41220 211 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RPL34P49207 117 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 PRIM2P49643 509 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CRYBB1P53674 252 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 CDH8P55286 799 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SCAND1P57086 179 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 IL9RQ01113 521 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 OTUD4Q01804 1114 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 BST2Q10589 180 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 XRCC4Q13426 336 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 KRT81Q14533 505 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 KYNUQ16719 465 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CCDC142Q17RM4 750 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 EFHC1Q5JVL4 640 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 FBXO47Q5MNV8 452 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 SFRP5Q5T4F7 317 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 TTC19Q6DKK2 380 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 OR6B2Q6IFH4 312 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 C6orf89Q6UWU4 347 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RSPH3Q86UC2 560 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 EXOC3L1Q86VI1 746 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RFX6Q8HWS3 928 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 C7orf61Q8IZ16 206 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CAMKK1Q8N5S9 505 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 ANKRD52Q8NB46 1076 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 FBXO15Q8NCQ5 510 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 SPATA18Q8TC71 538 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 ACTL9Q8TC94 416 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 LRRC39Q96DD0 335 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RTP4Q96DX8 246 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 CPB2Q96IY4 423 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 RSRC1Q96IZ7 334 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 CCDC140Q96MF4 163 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 ZNF317Q96PQ6 595 aaPredicted RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 BARD1Q99728 777 aaKnown RBP7.92□□□□□ -1.14
SNX13-208ENST00000482558 ZNF670Q9BS34 389 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 TTLL2Q9BWV7 592 aa7.92□□□□□ -1.14
SNX13-208ENST00000482558 LMAN2LQ9H0V9 348 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms