RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 AIF1P55008 147 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 MLLT6P55198 1093 aaPredicted RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 EFEMP1Q12805 493 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 TDGQ13569 410 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 HTR4Q13639 388 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 MTF1Q14872 753 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 PDGFRLQ15198 375 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 ARL13BQ3SXY8 428 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 DCAF6Q58WW2 860 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 BRMS1LQ5PSV4 323 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 E4F1Q66K89 784 aaPredicted RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 MMS22LQ6ZRQ5 1243 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 STRADAQ7RTN6 431 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 BHLHA9Q7RTU4 235 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 SCD5Q86SK9 330 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 RHOT2Q8IXI1 618 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 DEFB106AQ8N104 65 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 ZNF557Q8N988 423 aaPredicted RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 CSGALNACT1Q8TDX6 532 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 DNASE1L2Q92874 299 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 PGAP3Q96FM1 320 aaPredicted RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC2A13Q96QE2 648 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 PCDHB18PQ96TA0 734 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 EIF3CQ99613 913 aaKnown RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 TRMT61BQ9BVS5 477 aaKnown RBP6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 SMOC2Q9H3U7 446 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 NMUR1Q9HB89 426 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 CAPN10Q9HC96 672 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 PARD6AQ9NPB6 346 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 MARCH2Q9P0N8 246 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 UVRAGQ9P2Y5 699 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 EMC9Q9Y3B6 208 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 CPQQ9Y646 472 aa6.95□□□□□ -1.3
CTNNB1-213ENST00000482042 COL4A3Q01955 1670 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 GOLGA8SH3BPF8 625 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 LEFTY2O00292 366 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ARHGAP6O43182 974 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 TRIM13O60858 407 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 RNF8O76064 485 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 TRUB2O95900 331 aaKnown RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 PTMAP06454 111 aaKnown RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ALADP13716 330 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 GLULP15104 373 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ABCB4P21439 1286 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CCR1P32246 355 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 MAGEA1P43355 309 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC11A2P49281 568 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 SULT1E1P49888 294 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 TBX4P57082 545 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 DEUP1Q05D60 604 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 GFPT1Q06210 699 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 FCHO2Q0JRZ9 810 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CCDC173Q0VFZ6 552 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 PTP4A2Q12974 167 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 E2F5Q15329 346 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ZNF77Q15935 545 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ASTE1Q2TB18 679 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 SLC25A52Q3SY17 297 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 STXBP5Q5T5C0 1151 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 PLEKHA7Q6IQ23 1121 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 POMZP3Q6PJE2 187 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 VITQ6UXI7 678 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 HTR3DQ70Z44 454 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CPA6Q8N4T0 437 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 BVESQ8NE79 360 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 FEZF2Q8TBJ5 459 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 SH3RF2Q8TEC5 729 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 FNIP1Q8TF40 1166 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CLEC4CQ8WTT0 213 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 OSCP1Q8WVF1 389 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 FGF14Q92915 247 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 USP13Q92995 863 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 ATP2A3Q93084 1043 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CYP2S1Q96SQ9 504 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 UHRF1Q96T88 793 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CHP1Q99653 195 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 DDX23Q9BUQ8 820 aaKnown RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 RNF38Q9H0F5 515 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 BRD9Q9H8M2 597 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 IP6K2Q9UHH9 426 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CDH22Q9UJ99 828 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 DUSP12Q9UNI6 340 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 EPN1Q9Y6I3 576 aaPredicted RBP6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 NUMBLQ9Y6R0 609 aa6.94□□□□□ -1.3
CTNNB1-213ENST00000482042 CEP192Q8TEP8 1941 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NUP205Q92621 2012 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 M0QYT0 321 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 IRAK2O43187 625 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 ENDOD1O94919 500 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 NDUFA10O95299 355 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 IGLV3-25P01717 112 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 PLEKP08567 350 aaPredicted RBP6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 PDGFRAP16234 1089 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 BMP7P18075 431 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 PAMP19021 973 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 HOXA5P20719 270 aa6.93□□□□□ -1.3
CTNNB1-213ENST00000482042 SP100P23497 879 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms