RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SLC22A18ASQ8N1D0 253 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 NTAN1Q96AB6 310 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 VOPP1Q96AW1 172 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 SLC17A9Q9BYT1 436 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 MAGEH1Q9H213 219 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
CLK1-211ENST00000481641 TAS2R14Q9NYV8 317 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 GGT7Q9UJ14 662 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 ITM2BQ9Y287 266 aa18.88■□□□□ 0.61
CLK1-211ENST00000481641 C16orf96A6NNT2 1141 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 KRIT1O00522 736 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 SIGLEC6O43699 453 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 DGKAP23743 735 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 ABL2P42684 1182 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 C1QBPQ07021 282 aaKnown RBP18.87■□□□□ 0.61
CLK1-211ENST00000481641 KDM7AQ6ZMT4 941 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 Q6ZSR6 202 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 TMPRSS12Q86WS5 348 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 ZNF354CQ86Y25 554 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 DNAAF5Q86Y56 855 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 BAP1Q92560 729 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 ISG20Q96AZ6 181 aaKnown RBP18.87■□□□□ 0.61
CLK1-211ENST00000481641 FEM1CQ96JP0 617 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 BMFQ96LC9 184 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 KLHL11Q9NVR0 708 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 FZD10Q9ULW2 581 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 HPCAL4Q9UM19 191 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 GPSM3Q9Y4H4 160 aa18.87■□□□□ 0.61
CLK1-211ENST00000481641 URB1O60287 2271 aaKnown RBP18.86■□□□□ 0.61
CLK1-211ENST00000481641 ADAMTS20P59510 1910 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 NBEAQ8NFP9 2946 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 POM121BA6NF01 834 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 FFAR2O15552 330 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 BUB1O43683 1085 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 KDELR3O43731 214 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 CREB3O43889 395 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 UGT2B4P06133 528 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 JUPP14923 745 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 CKMT2P17540 419 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 EPHB2P29323 1055 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 ZNF143P52747 638 aaPredicted RBP18.86■□□□□ 0.61
CLK1-211ENST00000481641 RPS21P63220 83 aaKnown RBP18.86■□□□□ 0.61
CLK1-211ENST00000481641 OGDHQ02218 1023 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 MYLK3Q32MK0 819 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 PROX2Q3B8N5 592 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 EFHC2Q5JST6 749 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 LRRC73Q5JTD7 316 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 PPP1R15BQ5SWA1 713 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 HES3Q5TGS1 186 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 ACAD10Q6JQN1 1059 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 PTAR1Q7Z6K3 402 aaPredicted RBP18.86■□□□□ 0.61
CLK1-211ENST00000481641 ABI3BPQ7Z7G0 1075 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 MCOLN2Q8IZK6 566 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 RTL3Q8N8U3 475 aaKnown RBP18.86■□□□□ 0.61
CLK1-211ENST00000481641 OR2AP1Q8NGE2 309 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 RETREG1Q9H6L5 497 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 MYLKQ15746 1914 aa18.86■□□□□ 0.61
CLK1-211ENST00000481641 CACNA1GO43497 2377 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 IGLON5A6NGN9 336 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 TMCO5BA8MYB1 307 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 SPINT1O43278 529 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 TMCC1O94876 653 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 GSRP00390 522 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 C1SP09871 688 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 MYF5P13349 255 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 HOXB3P14651 431 aaPredicted RBP18.85■□□□□ 0.61
CLK1-211ENST00000481641 FERP16591 822 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 SNRPD1P62314 119 aaKnown RBP18.85■□□□□ 0.61
CLK1-211ENST00000481641 ANO6Q4KMQ2 910 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 ZNF805Q5CZA5 627 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 KIAA1161Q6NSJ0 714 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 PLPP6Q8IY26 295 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 PDCD7Q8N8D1 485 aaKnown RBP18.85■□□□□ 0.61
CLK1-211ENST00000481641 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
CLK1-211ENST00000481641 HMCESQ96FZ2 354 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 KLHL32Q96NJ5 620 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 GPATCH2LQ9NWQ4 482 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 HS3ST3A1Q9Y663 406 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 ITPR1Q14643 2758 aa18.85■□□□□ 0.61
CLK1-211ENST00000481641 A6NNZ2 444 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 ATMINO43313 823 aaPredicted RBP18.84■□□□□ 0.61
CLK1-211ENST00000481641 AP1G1O43747 822 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 PIAS2O75928 621 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 POP4O95707 220 aaKnown RBP18.84■□□□□ 0.61
CLK1-211ENST00000481641 MBD3O95983 291 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 GIMD1P0DJR0 217 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 ITIH2P19823 946 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 TNFAIP3P21580 790 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 GEMIN4P57678 1058 aaKnown RBP18.84■□□□□ 0.61
CLK1-211ENST00000481641 TARDBPQ13148 414 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLK1-211ENST00000481641 COL28A1Q2UY09 1125 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 TPRG1LQ5T0D9 272 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 DCUN1D2Q6PH85 259 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 KLF6Q99612 283 aaPredicted RBP18.84■□□□□ 0.61
CLK1-211ENST00000481641 CNPY3Q9BT09 278 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 SYT11Q9BT88 431 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 DNAJC28Q9NX36 388 aa18.84■□□□□ 0.61
CLK1-211ENST00000481641 DKK4Q9UBT3 224 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms