RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 BMPR2Q13873 1038 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 RUNX2Q13950 521 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 RNPS1Q15287 305 aaKnown RBP5.55□□□□□ -1.52
COPA-203ENST00000481040 ZSCAN23Q3MJ62 389 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 ODF2Q5BJF6 829 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 VWA1Q6PCB0 445 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 KIRREL2Q6UWL6 708 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 CLEC17AQ6ZS10 378 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 MDGA2Q7Z553 956 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 GLRX5Q86SX6 157 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 EPHX4Q8IUS5 362 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 SFTPA1Q8IWL2 248 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 NAT8LQ8N9F0 302 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 EXD3Q8N9H8 876 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.55□□□□□ -1.52
COPA-203ENST00000481040 TMCO6Q96DC7 493 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 KAZALD1Q96I82 304 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 ADAM2Q99965 735 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 CITED2Q99967 270 aaPredicted RBP5.55□□□□□ -1.52
COPA-203ENST00000481040 ADGRE3Q9BY15 652 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 ST6GALNAC4Q9H4F1 302 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 ASAH2Q9NR71 780 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 SLC6A13Q9NSD5 602 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 PPP4R1LQ9P1A2 415 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 DHDHQ9UQ10 334 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 DTX4Q9Y2E6 619 aa5.55□□□□□ -1.52
COPA-203ENST00000481040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.55□□□□□ -1.52
COPA-203ENST00000481040 OTOL1A6NHN0 477 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 PSMA7O14818 248 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 PAPSS1O43252 624 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 PRICKLE3O43900 615 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 HS6ST1O60243 411 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 ADH4P08319 380 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 RFPL3SP0C7P2 107 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 C6P13671 934 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 ZFXP17010 805 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 KRT2P35908 639 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 CFHR3Q02985 330 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 WASHC5Q12768 1159 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 IKQ13123 557 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 CRHR2Q13324 411 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 OLIG2Q13516 323 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 SNTB1Q13884 538 aaKnown RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 FGFBP1Q14512 234 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 VEPH1Q14D04 833 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 E2F5Q15329 346 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 RPE65Q16518 533 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 C15orf59Q2T9L4 293 aaPredicted RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 ALG11Q2TAA5 492 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 TBC1D25Q3MII6 688 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 CRY2Q49AN0 593 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 TRAT1Q6PIZ9 186 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 Q6ZSN1 163 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 LNX2Q8N448 690 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 MINDY1Q8N5J2 469 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 TMCO5AQ8N6Q1 288 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 AMER2Q8N7J2 671 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 SYT8Q8NBV8 401 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 ABHD11Q8NFV4 315 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 OR8H1Q8NGG4 311 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 FEZF2Q8TBJ5 459 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 SECISBP2LQ93073 1101 aaKnown RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 RFKQ969G6 155 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 FER1L6-AS2Q96M78 137 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 DGAT2Q96PD7 388 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 PAFAH2Q99487 392 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 ABHD14AQ9BUJ0 271 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 THUMPD3Q9BV44 507 aaKnown RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 KIF9Q9HAQ2 790 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 Q9N2J8 555 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 SH3BP4Q9P0V3 963 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 SEMA5BQ9P283 1151 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 NLKQ9UBE8 527 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 CNOT8Q9UFF9 292 aaKnown RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 ANAPC2Q9UJX6 822 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 REXO2Q9Y3B8 237 aaKnown RBP5.54□□□□□ -1.52
COPA-203ENST00000481040 CLDN16Q9Y5I7 305 aa5.54□□□□□ -1.52
COPA-203ENST00000481040 TRBC2A0A5B9 178 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 WDR27A2RRH5 827 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 HTATSF1O43719 755 aaKnown RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 FOXD2O60548 495 aaPredicted RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 LPXNO60711 386 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 NDUFS3O75489 264 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 TPPPO94811 219 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 C22orf31O95567 290 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 CHRM2P08172 466 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 FCGR2AP12318 317 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 COMTP21964 271 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 TGM2P21980 687 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 FPR3P25089 353 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PTAFRP25105 342 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 HIBADHP31937 336 aaKnown RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 CDAP32320 146 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 HNF4AP41235 474 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 SKIV2L2P42285 1042 aaKnown RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 VPS41P49754 854 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 YWHAZP63104 245 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms