RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 HORMAD1Q86X24 394 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 THAP2Q9H0W7 228 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 LRRK1Q38SD2 2015 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 A0A1W2PQU0 124 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 WNT9AO14904 365 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 PCDHGA12O60330 932 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 CBFA2T3O75081 653 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 CYP1A2P05177 515 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 ADRB3P13945 408 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 HCAR3P49019 387 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 OVGP1Q12889 678 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 SUZ12Q15022 739 aaKnown RBP17.28■□□□□ 0.36
HSPG2-209ENST00000480900 MYLK3Q32MK0 819 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 PPP6R3Q5H9R7 873 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-209ENST00000480900 IQCHQ86VS3 1027 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 RYBPQ8N488 228 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-209ENST00000480900 MFSD2AQ8NA29 543 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 OR8K1Q8NGG5 319 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 CAMK1GQ96NX5 476 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 DNAJC7Q99615 494 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 NUP85Q9BW27 656 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 OSBPL1AQ9BXW6 950 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 GDF3Q9NR23 364 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 IP6K2Q9UHH9 426 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 PCOLCE2Q9UKZ9 415 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 NENFQ9UMX5 172 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 PCDHB9Q9Y5E1 797 aa17.28■□□□□ 0.36
HSPG2-209ENST00000480900 COL5A1P20908 1838 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ARHGAP42A6NI28 874 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 PRAMEF26H0Y7S4 382 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 TLR4O00206 839 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 KRIT1O00522 736 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 DAPK3O43293 454 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 AP1G1O43747 822 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 MAGEC1O60732 1142 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 PCDH8O95206 1070 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 IGSF6O95976 241 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ERCC2P18074 760 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 FAM193AP78312 1265 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 RAD51Q06609 339 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 DPYSQ14117 519 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 TRIP6Q15654 476 aaKnown RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 DPYSL2Q16555 572 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ZNF284Q2VY69 593 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 BOLA3Q53S33 107 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ZNF805Q5CZA5 627 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 CCDC122Q5T0U0 273 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ATXN7L2Q5T6C5 722 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 AFMIDQ63HM1 303 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 FBXL19Q6PCT2 694 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 PARS2Q7L3T8 475 aaKnown RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ZSCAN30Q86W11 494 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 VSTM4Q8IW00 320 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 TMEM145Q8NBT3 493 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 OR6K2Q8NGY2 324 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 SETD7Q8WTS6 366 aaKnown RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 RAB7BQ96AH8 199 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 VOPP1Q96AW1 172 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ELF4Q99607 663 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ZWILCHQ9H900 591 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 UBA2Q9UBT2 640 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-209ENST00000480900 ANAPC7Q9UJX3 599 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 WASF3Q9UPY6 502 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 MFHAS1Q9Y4C4 1052 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 PTPRBP23467 1997 aa17.27■□□□□ 0.36
HSPG2-209ENST00000480900 IGF2RP11717 2491 aa17.27■□□□□ 0.35
HSPG2-209ENST00000480900 A0A1B0GTQ1 180 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 KCNK3O14649 394 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 YKT6O15498 198 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 PRAMEF11O60813 436 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 UGT2B4P06133 528 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 IL1R2P27930 398 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 GKP32189 559 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 EIF4A3P38919 411 aaKnown RBP17.26■□□□□ 0.35
HSPG2-209ENST00000480900 NXPH1P58417 271 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 RHOAP61586 193 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 FOXC1Q12948 553 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 STAT4Q14765 748 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 TMEM259Q4ZIN3 620 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 GLRX5Q86SX6 157 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 BAHD1Q8TBE0 780 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-209ENST00000480900 TEKT4Q8WW24 435 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 CELF6Q96J87 481 aaKnown RBP17.26■□□□□ 0.35
HSPG2-209ENST00000480900 SLC39A8Q9C0K1 460 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 ERVMER34-1Q9H9K5 563 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 PDFQ9HBH1 243 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
HSPG2-209ENST00000480900 ZFR2Q9UPR6 939 aaKnown RBP17.26■□□□□ 0.35
HSPG2-209ENST00000480900 FADS3Q9Y5Q0 445 aa17.26■□□□□ 0.35
HSPG2-209ENST00000480900 SSU72P8A0A1W2PR75 194 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 C16orf96A6NNT2 1141 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 H3BRJ5 948 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 SLC31A1O15431 190 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 TPM1P09493 284 aa17.25■□□□□ 0.35
HSPG2-209ENST00000480900 TCF4P15884 667 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms