RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RAMP2O60895 175 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 MAP3K6O95382 1288 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 IGLV3-19P01714 112 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ATP5BP06576 529 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 SYPP08247 313 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 DLDP09622 509 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 KRT10P13645 584 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 HLA-EP13747 358 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 CTNNA2P26232 953 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 HTR7P34969 479 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 CTNNA1P35221 906 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 TPMTP51580 245 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ZNF135P52742 658 aaPredicted RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 PLK1P53350 603 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 SLC14A1Q13336 389 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ZNF211Q13398 564 aaPredicted RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 SLC12A1Q13621 1099 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ZNF234Q14588 700 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 POLD3Q15054 466 aaPredicted RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 ZNF423Q2M1K9 1284 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 SDE2Q6IQ49 451 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 AADACL2Q6P093 401 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 LINGO4Q6UY18 593 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 CCNI2Q6ZMN8 369 aaPredicted RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 SPOCD1Q6ZMY3 1216 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 DBX2Q6ZNG2 339 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 MARCH9Q86YJ5 346 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 KATNAL2Q8IYT4 538 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 RGL4Q8IZJ4 473 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ZCCHC9Q8N567 271 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 UBL4BQ8N7F7 174 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 FAM71BQ8TC56 605 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ALG3Q92685 438 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ARHGEF2Q92974 986 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 TTC17Q96AE7 1141 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 HMCESQ96FZ2 354 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 RNF157Q96PX1 679 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ALS2CR12Q96Q35 445 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ZNF670Q9BS34 389 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 GPR174Q9BXC1 333 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 MAK16Q9BXY0 300 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 SLC39A8Q9C0K1 460 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 KLC2Q9H0B6 622 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 MTG2Q9H4K7 406 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 PRDM16Q9HAZ2 1276 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ATP13A1Q9HD20 1204 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 VPS51Q9UID3 782 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 SLCO3A1Q9UIG8 710 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 PCOLCE2Q9UKZ9 415 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 PLA2G4CQ9UP65 541 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 ERVW-1Q9UQF0 538 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 FNDC3AQ9Y2H6 1198 aaKnown RBP9.24□□□□□ -0.93
VCP-206ENST00000480327 ACTL7AQ9Y615 435 aa9.24□□□□□ -0.93
VCP-206ENST00000480327 KALRNO60229 2985 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 A0A1B0GTW7 788 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 METTL12A8MUP2 240 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 TTC34A8MYJ7 566 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 K7ERQ8 282 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 DDX3YO15523 660 aaKnown RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 TIMM44O43615 452 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 MFSD11O43934 449 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 BNIP3LO60238 219 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 NDUFS2O75306 463 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 DKK1O94907 266 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ZRANB2O95218 330 aaKnown RBP eCLIP9.23□□□□□ -0.93
VCP-206ENST00000480327 MT-CO1P00395 513 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ASLP04424 464 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 C7P10643 843 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 PYGMP11217 842 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 PEX5P50542 639 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 PAPOLAP51003 745 aaKnown RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 RWDD2BP57060 319 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ST8SIA6P61647 398 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ECT2LQ008S8 904 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 EIF4HQ15056 248 aaKnown RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 PTPRNQ16849 979 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ACCSLQ4AC99 568 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ZNF569Q5MCW4 686 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 DCAF12L1Q5VU92 463 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 NCBP2-AS2Q69YL0 99 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 C19orf48Q6RUI8 117 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 NPNTQ6UXI9 565 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 SERPINA13PQ6UXR4 307 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ARHGAP36Q6ZRI8 547 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 GLRX5Q86SX6 157 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 CACUL1Q86Y37 369 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 ARHGAP12Q8IWW6 846 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 RCOR2Q8IZ40 523 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 UMODL1-AS1Q8N2C9 162 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 PQLC3Q8N755 202 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 EXD1Q8NHP7 514 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 LRRN4Q8WUT4 740 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 HAUS1Q96CS2 278 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 FAF2Q96CS3 445 aa9.23□□□□□ -0.93
VCP-206ENST00000480327 RBM41Q96IZ5 413 aaKnown RBP9.23□□□□□ -0.93
VCP-206ENST00000480327 MRGPRX3Q96LB0 322 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms