RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ECT2LQ008S8 904 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 SLC6A3Q01959 620 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 KCNC4Q03721 635 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 VAC14Q08AM6 782 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 ZNF177Q13360 481 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 ZNF211Q13398 564 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 ACCSLQ4AC99 568 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 HSP90AA4PQ58FG1 418 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 SLC45A4Q5BKX6 768 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 PITRM1Q5JRX3 1037 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 ACBD5Q5T8D3 534 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 SYPL2Q5VXT5 272 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 APCDD1Q8J025 514 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 EXD3Q8N9H8 876 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 MFSD2AQ8NA29 543 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 KDM1BQ8NB78 822 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 OR14C36Q8NHC7 312 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 MED8Q96G25 268 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 SLC39A13Q96H72 371 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 PRR11Q96HE9 360 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 VCPIP1Q96JH7 1222 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 RPL10LQ96L21 214 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 CCDC114Q96M63 670 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 ZNF578Q96N58 590 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 RPRD1AQ96P16 312 aaPredicted RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 FUT8Q9BYC5 575 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 TRIM4Q9C037 500 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 ACBD3Q9H3P7 528 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 TRMT1Q9NXH9 659 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.81□□□□□ -1.32
VCP-205ENST00000479300 CYTH4Q9UIA0 394 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 XPO7Q9UIA9 1087 aaKnown RBP6.81□□□□□ -1.32
VCP-205ENST00000479300 BSNQ9UPA5 3926 aa6.81□□□□□ -1.32
VCP-205ENST00000479300 UNC79Q9P2D8 2635 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 KIF26BQ2KJY2 2108 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3DA0A087WVF3 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3IA0A087WXS9 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3EA0A087X179 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3KA0A087X1G2 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 RCCD1A6NED2 376 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3FA6NER0 549 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 CAPN8A6NHC0 703 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 BECN2A8MW95 431 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3LB9A6J9 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 C1QTNF3-AMACRE9PGA6 284 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 K7ENP7 123 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 FOXN3O00409 490 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 PPP1R12AO14974 1030 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 FFAR2O15552 330 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 KLK10O43240 276 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 EFSO43281 561 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SLC28A2O43868 658 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 LZTS3O60299 673 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 USP12O75317 370 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 CSO75390 466 aaKnown RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 ERLIN1O75477 346 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 DAB1O75553 588 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 GRAP2O75791 330 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SEC31AO94979 1220 aaKnown RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 ADH1BP00325 375 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 IL1BP01584 269 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TUBBP07437 444 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3HP0C7X1 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 CKMT1AP12532 417 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 PDGFRAP16234 1089 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 LSSP48449 732 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SULT1E1P49888 294 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 ERVPABLB-1P60509 514 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 DEUP1Q05D60 604 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 CCDC15Q0P6D6 951 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 DRAP1Q14919 205 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 DPCR1Q3MIW9 517 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 POM121L1PQ3SYA9 428 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 BRMS1LQ5PSV4 323 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 FAM102AQ5T9C2 384 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 FAM46CQ5VWP2 391 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3GQ6DHY5 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3CQ6IPX1 549 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 INO80CQ6PI98 192 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 FAM183BPQ6ZVS7 135 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SLC47A2Q86VL8 602 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 IQCHQ86VS3 1027 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TBC1D3Q8IZP1 549 aaPredicted RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 TMEM145Q8NBT3 493 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 OR4C6Q8NH72 309 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 FAM71BQ8TC56 605 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 FRS2Q8WU20 508 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 KCNE4Q8WWG9 221 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 OR8D1Q8WZ84 308 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 C18orf8Q96DM3 657 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SLC2A13Q96QE2 648 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 SPAG5Q96R06 1193 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 CPXM1Q96SM3 734 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 BPIFA3Q9BQP9 254 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 NAT10Q9H0A0 1025 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms