RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 OR2T34Q8NGX1 318 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 OR2T3Q8NH03 318 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ATXN7L3BQ96GX2 97 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 MAGED4Q96JG8 741 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 MTMR12Q9C0I1 747 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 APOBEC3GQ9HC16 384 aaKnown RBP21.48■■□□□ 1.03
SDF4-206ENST00000478938 ABCB10Q9NRK6 738 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 ARMC1Q9NVT9 282 aa21.48■■□□□ 1.03
SDF4-206ENST00000478938 TNRC6CQ9HCJ0 1690 aaKnown RBP21.48■■□□□ 1.03
SDF4-206ENST00000478938 FOSP01100 380 aaPredicted RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 CALB1P05937 261 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 KRT7P08729 469 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 CD40LGP29965 261 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 PSMD8P48556 350 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 SLC26A2P50443 739 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 RHBDL3P58872 404 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 PPP2R2BQ00005 443 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 NOMO1Q15155 1222 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 LSMEM1Q8N8F7 131 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 NIPA2Q8N8Q9 360 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 JOSD2Q8TAC2 188 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 PNPT1Q8TCS8 783 aaKnown RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 UPF3AQ9H1J1 476 aaKnown RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 WDR6Q9NNW5 1121 aaKnown RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 ARIH1Q9Y4X5 557 aaPredicted RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 ARSAP15289 507 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 ITIH1P19827 911 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 MAGP20916 626 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 ALDH4A1P30038 563 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 TMEM236Q5W0B7 351 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 ZCCHC8Q6NZY4 707 aaKnown RBP21.47■■□□□ 1.03
SDF4-206ENST00000478938 LYPD8Q6UX82 237 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 OSTM1Q86WC4 334 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 ZNF606Q8WXB4 792 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 VMP1Q96GC9 406 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 MXRA8Q9BRK3 442 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 ZNF577Q9BSK1 485 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 SDCBP2Q9H190 292 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 PTPRFP10586 1907 aa21.47■■□□□ 1.03
SDF4-206ENST00000478938 WDR27A2RRH5 827 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 TBKBP1A7MCY6 615 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 SLC22A1O15245 554 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CCNKO75909 580 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 RPL14P50914 215 aaKnown RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 FPGSQ05932 587 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 IKQ13123 557 aaPredicted RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 PPIL2Q13356 520 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CUL2Q13617 745 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 EML3Q32P44 896 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CATSPEREQ5SY80 951 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 NEK5Q6P3R8 708 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CASC4Q6P4E1 433 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 SFRP1Q8N474 314 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 C9orf16Q9BUW7 83 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 SPAG4Q9NPE6 437 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CCDC177Q9NQR7 707 aaPredicted RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 AGPAT4Q9NRZ5 378 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 PIH1D1Q9NWS0 290 aaKnown RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 ADPRHL2Q9NX46 363 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CACNA2D2Q9NY47 1150 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CD300AQ9UGN4 299 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 ACOX3O15254 700 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 STAM2O75886 525 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 RASAL1O95294 804 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 ITGBL1O95965 494 aaPredicted RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 KRT8P05787 483 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 RBL1P28749 1068 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 SEPHS1P49903 392 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 PIGFQ07326 219 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 INTS5Q6P9B9 1019 aaKnown RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 CMTR2Q8IYT2 770 aaKnown RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 MAGEE2Q8TD90 523 aaPredicted RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 DHRS9Q9BPW9 319 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 FAM213AQ9BRX8 229 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 AMNQ9BXJ7 453 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 ALOXE3Q9BYJ1 711 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 CLPBQ9H078 707 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 MIR1-1HGQ9H1L0 117 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 MRPL40Q9NQ50 206 aaKnown RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 SMPD3Q9NY59 655 aaPredicted RBP21.46■■□□□ 1.03
SDF4-206ENST00000478938 PKD2L1Q9P0L9 805 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 ZDHHC2Q9UIJ5 367 aa21.46■■□□□ 1.03
SDF4-206ENST00000478938 UGT2B11O75310 529 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 ALDH1A2O94788 518 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 PIGNO95427 931 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 MAPTP10636 758 aaKnown RBP21.45■■□□□ 1.03
SDF4-206ENST00000478938 CTF1Q16619 201 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 INSCQ1MX18 579 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 SLC39A4Q6P5W5 647 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 TFAP2DQ7Z6R9 452 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 EMC1Q8N766 993 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 NDNFQ8TB73 568 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 LRRC39Q96DD0 335 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 GIMAP4Q9NUV9 329 aa21.45■■□□□ 1.03
SDF4-206ENST00000478938 GAKO14976 1311 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 F5H423 210 aaPredicted RBP21.45■■□□□ 1.02
SDF4-206ENST00000478938 VWA5AO00534 786 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 TRIM13O60858 407 aa21.45■■□□□ 1.02
SDF4-206ENST00000478938 GPC4O75487 556 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms