RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 EIF3IQ13347 325 aaKnown RBP17.5■□□□□ 0.39
VIM-204ENST00000478746 PDCLQ13371 301 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 PNOCQ13519 176 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 ALFQ53S48 1182 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 FAXCQ5TGI0 409 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 SETD3Q86TU7 594 aaPredicted RBP17.5■□□□□ 0.39
VIM-204ENST00000478746 DCAF4L2Q8NA75 395 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 SEMA3CQ99985 751 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 SLC13A1Q9BZW2 595 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 GOLPH3LQ9H4A5 285 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 ASNSD1Q9NWL6 643 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 GULP1Q9UBP9 304 aa17.5■□□□□ 0.39
VIM-204ENST00000478746 TLN1Q9Y490 2541 aaKnown RBP17.5■□□□□ 0.39
VIM-204ENST00000478746 A0A1W2PQ27 194 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 A0A1W2PQ64 194 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 NEMP1O14524 444 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 TSPAN6O43657 245 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 ZNF821O75541 412 aaPredicted RBP17.49■□□□□ 0.39
VIM-204ENST00000478746 ADCY5O95622 1261 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 AFPP02771 609 aaKnown RBP17.49■□□□□ 0.39
VIM-204ENST00000478746 NTRK1P04629 796 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 CARD16Q5EG05 197 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 B3GNT8Q7Z7M8 397 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 HSCBQ8IWL3 235 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 PHACTR4Q8IZ21 702 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 ASB12Q8WXK4 309 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 TBATAQ96M53 351 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 GFM1Q96RP9 751 aaKnown RBP17.49■□□□□ 0.39
VIM-204ENST00000478746 SPON2Q9BUD6 331 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 ACSL6Q9UKU0 697 aa17.49■□□□□ 0.39
VIM-204ENST00000478746 M0QYT0 321 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 TSHRP16473 764 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 GNA15P30679 374 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 RETSATQ6NUM9 610 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 LRRC31Q6UY01 552 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 PARS2Q7L3T8 475 aaKnown RBP17.48■□□□□ 0.39
VIM-204ENST00000478746 PCDH20Q8N6Y1 951 aaKnown RBP17.48■□□□□ 0.39
VIM-204ENST00000478746 ZSCAN1Q8NBB4 408 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 DENND6BQ8NEG7 585 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 CEP63Q96MT8 703 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 GSDMAQ96QA5 445 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 LRRC61Q9BV99 259 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 GTPBP4Q9BZE4 634 aaKnown RBP17.48■□□□□ 0.39
VIM-204ENST00000478746 FOXP3Q9BZS1 431 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 CEP44Q9C0F1 390 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 CLPBQ9H078 707 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
VIM-204ENST00000478746 ACP6Q9NPH0 428 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 SEPT3Q9UH03 358 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 DOLKQ9UPQ8 538 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 FLNCQ14315 2725 aa17.48■□□□□ 0.39
VIM-204ENST00000478746 DRGXA6NNA5 263 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
VIM-204ENST00000478746 JMJD7P0C870 316 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 LIPCP11150 499 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 HGFP14210 728 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 OR1E1P30953 314 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 NOS2P35228 1153 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 CCNHP51946 323 aaPredicted RBP17.47■□□□□ 0.39
VIM-204ENST00000478746 CCL7P80098 99 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 TBR1Q16650 682 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 MANEAQ5SRI9 462 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 C11orf57Q6ZUT1 292 aaPredicted RBP17.47■□□□□ 0.39
VIM-204ENST00000478746 TFAP2DQ7Z6R9 452 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 WDTC1Q8N5D0 677 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 OR7D4Q8NG98 312 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 SCG3Q8WXD2 468 aaKnown RBP17.47■□□□□ 0.39
VIM-204ENST00000478746 RAB7BQ96AH8 199 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 CENPTQ96BT3 561 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 CPXM1Q96SM3 734 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 TKTL2Q9H0I9 626 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 MPP6Q9NZW5 540 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 PNMA8BQ9ULN7 279 aaPredicted RBP17.47■□□□□ 0.39
VIM-204ENST00000478746 SNX10Q9Y5X0 201 aa17.47■□□□□ 0.39
VIM-204ENST00000478746 SERPINH1P50454 418 aaKnown RBP17.46■□□□□ 0.39
VIM-204ENST00000478746 YPEL5P62699 121 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 PPARDQ03181 441 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 BRMS1LQ5PSV4 323 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 ZNF683Q8IZ20 524 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 CCDC74AQ96AQ1 378 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 TMEM74Q96NL1 305 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 ZDHHC6Q9H6R6 413 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 PIGVQ9NUD9 493 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 ARHGEF38Q9NXL2 777 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 SIRPGQ9P1W8 387 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 ANKMY1Q9P2S6 941 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 HECAQ9UBI9 543 aaPredicted RBP17.46■□□□□ 0.39
VIM-204ENST00000478746 PISDQ9UG56 409 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 RABGEF1Q9UJ41 708 aa17.46■□□□□ 0.39
VIM-204ENST00000478746 ILVBLA1L0T0 632 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 C16orf96A6NNT2 1141 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 D6RAR5 112 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 PPFIA2O75334 1257 aa17.45■□□□□ 0.38
VIM-204ENST00000478746 ZMPSTE24O75844 475 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms