RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 C19orf43Q9BQ61 176 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SIKE1Q9BRV8 207 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 FAM96AQ9H5X1 160 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 ATP13A1Q9HD20 1204 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 SMYD2Q9NRG4 433 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
VMA21-203ENST00000477649 ANKRD6Q9Y2G4 727 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 TCAF1Q9Y4C2 921 aa8.05□□□□□ -1.12
VMA21-203ENST00000477649 MYO16Q9Y6X6 1858 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 LOC285095A0A1B0GVY8 99 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 CCT8L1PA6NM43 557 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SLC7A4O43246 635 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ATP9BO43861 1147 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 EDF1O60869 148 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 H2AFYO75367 372 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 CNTN5O94779 1100 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SNUPNO95149 360 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 RB1P06400 928 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 RHOCP08134 193 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 HMBSP08397 361 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SERPINF2P08697 491 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 POU2F2P09086 479 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 MBL2P11226 248 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 NEFHP12036 1026 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 CORO1AP31146 461 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 HOXA9P31269 272 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 MAGEA12P43365 314 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 KCNQ1P51787 676 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 KPNA2P52292 529 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 CORO7P57737 925 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 KCNC4Q03721 635 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 NSUN2Q08J23 767 aaKnown RBP eCLIP8.04□□□□□ -1.12
VMA21-203ENST00000477649 CCDC15Q0P6D6 951 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 MTM1Q13496 603 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 THOC5Q13769 683 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 SLC1A5Q15758 541 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 LACTB2Q53H82 288 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 INO80DQ53TQ3 878 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 DENND5AQ6IQ26 1287 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 LILRA6Q6PI73 481 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SRLQ86TD4 932 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ZNF354CQ86Y25 554 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 DENND1CQ8IV53 801 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 NDUFAF2Q8N183 169 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 TET1Q8NFU7 2136 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 GDAP1Q8TB36 358 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 USP33Q8TEY7 942 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 HERVK_113Q902F9 699 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ZNF75CPQ92670 426 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 PABPC5Q96DU9 382 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SERAC1Q96JX3 654 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 MRGPRX2Q96LB1 330 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 TSNARE1Q96NA8 513 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SAMD11Q96NU1 681 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ELAC2Q9BQ52 826 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 MGME1Q9BQP7 344 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 FICDQ9BVA6 458 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ACE2Q9BYF1 805 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 MANSC1Q9H8J5 431 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 KIF9Q9HAQ2 790 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 PDFQ9HBH1 243 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 NT5MQ9NPB1 228 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 NDFIP2Q9NV92 336 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 FGFR1OP2Q9NVK5 253 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 SIRPGQ9P1W8 387 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 UBA2Q9UBT2 640 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 AGO1Q9UL18 857 aaKnown RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 CORO1CQ9ULV4 474 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 NR2E3Q9Y5X4 410 aa8.04□□□□□ -1.12
VMA21-203ENST00000477649 ZFP37Q9Y6Q3 630 aaPredicted RBP8.04□□□□□ -1.12
VMA21-203ENST00000477649 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TRAV19A0A0A6YYK7 116 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ZBBXA8MT70 800 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 H3BNC9 293 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 J3KR12 359 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TGM5O43548 720 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 USP12O75317 370 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 PMPCBO75439 489 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 DCTN3O75935 186 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ATP5HO75947 161 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CXCL14O95715 111 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 NDST3O95803 873 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 MT-CYBP00156 380 aaPredicted RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 GLUD1P00367 558 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CNPP09543 421 aaKnown RBP8.03□□□□□ -1.12
VMA21-203ENST00000477649 HNRNPA1P09651 372 aaKnown RBP eCLIP8.03□□□□□ -1.12
VMA21-203ENST00000477649 ERVK-10P10266 1014 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 HDCP19113 662 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 GRK2P25098 689 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 ITGB8P26012 769 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 CRABP2P29373 138 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 TYK2P29597 1187 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 FOXN2P32314 431 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 BMPR1AP36894 532 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 MAPK8P45983 427 aa8.03□□□□□ -1.12
VMA21-203ENST00000477649 SERPINB4P48594 390 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms