RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 ADRA1AP35348 466 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PGGT1BP53609 377 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 IL9RQ01113 521 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 DNAJC3Q13217 504 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MTA1Q13330 715 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CBX2Q14781 532 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ACBD5Q5T8D3 534 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PACS1Q6VY07 963 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 KCNMB4Q86W47 210 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 NDUFAF2Q8N183 169 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ARRDC2Q8TBH0 407 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 WFDC5Q8TCV5 224 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 DENND1AQ8TEH3 1009 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CKAP2Q8WWK9 683 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SGSM3Q96HU1 749 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 GCNAQ96QF7 691 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 LRRC3Q9BY71 257 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PLXNA4Q9HCM2 1894 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CCL26Q9Y258 94 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 KIAA1671Q9BY89 1806 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MYOFQ9NZM1 2061 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 FAM237BA0A1B0GVD1 139 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MAGEB16A2A368 324 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 COPEO14579 308 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PRPF4O43172 522 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 RFPL1O75677 317 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 USP1O94782 785 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ASMTLO95671 621 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 RGRP47804 291 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CLCN4P51793 760 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MPP3Q13368 585 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CDH18Q13634 790 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 GALNT3Q14435 633 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 C5orf22Q49AR2 442 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PPM1JQ5JR12 505 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PCID2Q5JVF3 399 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 GPR158Q5T848 1215 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PKN3Q6P5Z2 889 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 KDELC1Q6UW63 502 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ST13P5Q8NFI4 369 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SP7Q8TDD2 431 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 POLR1EQ9GZS1 481 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 IQCGQ9H095 443 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 UBA2Q9UBT2 640 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ZNF180Q9UJW8 692 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 VPS28Q9UK41 221 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CLEC4EQ9ULY5 219 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SOX13Q9UN79 622 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TRAV19A0A0A6YYK7 116 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ILVBLA1L0T0 632 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 GREM1O60565 184 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CTBP1Q13363 440 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TEAD2Q15562 447 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CXorf57Q6NSI4 855 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SH2D5Q6ZV89 423 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TEX26Q8N6G2 289 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 TDRD5Q8NAT2 981 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PHOSPHO2Q8TCD6 241 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 PDCD6IPQ8WUM4 868 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 IFT43Q96FT9 208 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SRPK1Q96SB4 655 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 DDX50Q9BQ39 737 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 MTIF3Q9H2K0 278 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 NOD2Q9HC29 1040 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 SLCO1B3Q9NPD5 702 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 DNMT3BQ9UBC3 853 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 STK39Q9UEW8 545 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 LSM7Q9UK45 103 aaKnown RBP6.72□□□□□ -1.33
CCDC30-209ENST00000477155 REV3LO60673 3130 aa6.72□□□□□ -1.33
CCDC30-209ENST00000477155 ALPK3Q96L96 1907 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 TYW5A2RUC4 315 aaKnown RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 HGSO14964 777 aaPredicted RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 KDELR3O43731 214 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 MT-CO1P00395 513 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 ITGA2BP08514 1039 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 AVPR1AP37288 418 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 SERPINH1P50454 418 aaKnown RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 TMPRSS15P98073 1019 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 PTPRCAPQ14761 206 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 SIRPB2Q5JXA9 342 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 CYS1Q717R9 158 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 MARK2Q7KZI7 788 aaKnown RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 GRASPQ7Z6J2 395 aaPredicted RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 CMC1Q7Z7K0 106 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 MFN1Q8IWA4 741 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 DENND6AQ8IWF6 608 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 GPR65Q8IYL9 337 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 PPHLN1Q8NEY8 458 aaKnown RBP6.71□□□□□ -1.33
CCDC30-209ENST00000477155 BLOC1S5Q8TDH9 187 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 ING5Q8WYH8 240 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 NSMCE3Q96MG7 304 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 SMIM14Q96QK8 99 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 KIFC1Q9BW19 673 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 CAB39LQ9H9S4 337 aa6.71□□□□□ -1.33
CCDC30-209ENST00000477155 PDFQ9HBH1 243 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms