RNA–Protein interactions for RNA: ENST00000477112.1

DDX17-208, Transcript of DEAD-box helicase 17, human

TSL 2

Gene DDX17, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX17-208	ENST00000477112	CCDC43	Q96MW1	224 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	ATP6V0B	Q99437	205 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	DDX50	Q9BQ39	737 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	PDCD2L	Q9BRP1	358 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	KATNBL1	Q9H079	304 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	MMADHC	Q9H3L0	296 aa	Predicted RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	NELFA	Q9H3P2	528 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	SERHL2	Q9H4I8	314 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	BICC1	Q9H694	974 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	ZMAT3	Q9HA38	289 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	A1CF	Q9NQ94	594 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	DDX4	Q9NQI0	724 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	SACM1L	Q9NTJ5	587 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	ADPRHL2	Q9NX46	363 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	TAS2R3	Q9NYW6	316 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	NCDN	Q9UBB6	729 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	ORC3	Q9UBD5	711 aa	Predicted RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	FBXO40	Q9UH90	709 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	TRPS1	Q9UHF7	1281 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	BAG5	Q9UL15	447 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	PCDHA1	Q9Y5I3	950 aa		3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	3.03	□□□□□ -1.92
DDX17-208	ENST00000477112	BCL9	O00512	1426 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	C4A	P0C0L4	1744 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	PKD1L3	Q7Z443	1732 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MYH14	Q7Z406	1995 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CIC	Q96RK0	1608 aa	Predicted RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	KRTAP23-1	A1A580	65 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	OR6C65	A6NJZ3	312 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MYO1F	O00160	1098 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	KIAA0355	O15063	1070 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ARHGAP6	O43182	974 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ATP6V1G1	O75348	118 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ERAL1	O75616	437 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	GJB3	O75712	270 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CAMTA2	O94983	1202 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	PGM3	O95394	542 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	POMC	P01189	267 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CD1A	P06126	327 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	DLD	P09622	509 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	RARB	P10826	455 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MYL4	P12829	197 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ANXA13	P27216	316 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	RPL9	P32969	192 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CLCN4	P51793	760 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	BLVRA	P53004	296 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SOX8	P57073	446 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	STARD6	P59095	220 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	DSTN	P60981	165 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MRPS15	P82914	257 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ARHGAP8	P85298	464 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	DR1	Q01658	176 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	BFSP1	Q12934	665 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	COASY	Q13057	564 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	TARDBP	Q13148	414 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SLC13A2	Q13183	592 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	DOC2A	Q14183	400 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	GNA13	Q14344	377 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	LASP1	Q14847	261 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ADIPOQ	Q15848	244 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	RNF151	Q2KHN1	245 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	AAK1	Q2M2I8	961 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	FBXO43	Q4G163	708 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	FBXO48	Q5FWF7	155 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	XKR9	Q5GH70	373 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	RBM20	Q5T481	1227 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	STXBP5	Q5T5C0	1151 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CYP4A22	Q5TCH4	519 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ARL6IP4	Q66PJ3	421 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	JMJD6	Q6NYC1	403 aa	Predicted RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	TAF2	Q6P1X5	1199 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	KLC3	Q6P597	504 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112		Q6ZVL8	140 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	LUZP1	Q86V48	1076 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	LRRTM4	Q86VH4	590 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	HOOK3	Q86VS8	718 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	PLXDC1	Q8IUK5	500 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CPO	Q8IVL8	374 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CD302	Q8IX05	232 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SCYL3	Q8IZE3	742 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	LSMEM2	Q8N112	164 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	D2HGDH	Q8N465	521 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ZNF366	Q8N895	744 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	ANKRD20A12P	Q8NF67	263 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	OR2I1P	Q8NGU4	316 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CCDC110	Q8TBZ0	833 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	PIGO	Q8TEQ8	1089 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	CREB3L4	Q8TEY5	395 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SCARB1	Q8WTV0	552 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	TRAPPC12	Q8WVT3	735 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	WASF1	Q92558	559 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	HOXB13	Q92826	284 aa	Predicted RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SGK3	Q96BR1	496 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	NSUN4	Q96CB9	384 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MAEL	Q96JY0	434 aa	Known RBP	3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	NUDCD1	Q96RS6	583 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	MXD3	Q9BW11	206 aa		3.02	□□□□□ -1.93
DDX17-208	ENST00000477112	SORBS1	Q9BX66	1292 aa	Known RBP	3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms