RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PRKCEQ02156 737 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 ABRAXAS1Q6UWZ7 409 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 GLRX5Q86SX6 157 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 EPHX4Q8IUS5 362 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 CCDC60Q8IWA6 550 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PNPT1Q8TCS8 783 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 SGCDQ92629 289 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PPWD1Q96BP3 646 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 NTPCRQ9BSD7 190 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 RUBCNLQ9H714 662 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PSAT1Q9Y617 370 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HNRNPDLO14979 420 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HOXC11O43248 304 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 GRID2O43424 1007 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 H2AFYO75367 372 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 TRUB2O95900 331 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HLA-DOAP06340 250 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 MPSTP25325 297 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 RBL1P28749 1068 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 MIPP30301 263 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HLCSP50747 726 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 CACNB3P54284 484 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 NFE2Q16621 373 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 C6orf10Q5SRN2 563 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 GPAT2Q6NUI2 795 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PSD4Q8NDX1 1056 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 PPP1R36Q96LQ0 422 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 CSF3RQ99062 836 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HOXD1Q9GZZ0 328 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 RAD21L1Q9H4I0 556 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 SCUBE2Q9NQ36 999 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 GIMAP4Q9NUV9 329 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 SARDHQ9UL12 918 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 RAP2CQ9Y3L5 183 aa10.69□□□□□ -0.7
ABCF1-205ENST00000475993 COPG1Q9Y678 874 aaKnown RBP10.69□□□□□ -0.7
ABCF1-205ENST00000475993 HEATR9A2RTY3 570 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 PRORSD1PA6NEY8 169 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 DHX15O43143 795 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 EXTL3O43909 919 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TRIM13O60858 407 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 CHRNGP07510 517 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 POLR2CP19387 275 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TPSB2P20231 275 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TYK2P29597 1187 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 POLR2IP36954 125 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 RPL14P50914 215 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MAPK10P53779 464 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 IFITM3Q01628 133 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 SPP2Q13103 211 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 PDK2Q15119 407 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TPSAB1Q15661 275 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 INAVAQ3KP66 663 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 CCDC14Q49A88 953 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TREML2Q5T2D2 321 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 OTOP3Q7RTS5 596 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 FLAD1Q8NFF5 587 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 SLC7A14Q8TBB6 771 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 BSNDQ8WZ55 320 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TRIB2Q92519 343 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 SEPT8Q92599 483 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MAP6Q96JE9 813 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 GLT1D1Q96MS3 346 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MXRA8Q9BRK3 442 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 WDR12Q9GZL7 423 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 RMND5AQ9H871 391 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 HMG20AQ9NP66 347 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 AKIP1Q9NQ31 210 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 CD300AQ9UGN4 299 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 BCLAF3A2AJT9 711 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 SAC3D1A6NKF1 404 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 KCNH1O95259 989 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 UGT2B4P06133 528 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 C7P10643 843 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MAGEA12P43365 314 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MAP3K7CLP57077 242 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 FSTL1Q12841 308 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 NAB1Q13506 487 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 GRAPQ13588 217 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 TFDP2Q14188 446 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 IGSF11Q5DX21 431 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 CYP2R1Q6VVX0 501 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 DCP2Q8IU60 420 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 GRAPLQ8TC17 118 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 CDKL2Q92772 493 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 ISL2Q96A47 359 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 GATA5Q9BWX5 397 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 MTMR12Q9C0I1 747 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 NOL6Q9H6R4 1146 aaKnown RBP10.68□□□□□ -0.7
ABCF1-205ENST00000475993 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 C8orf4Q9NR00 106 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 USP18Q9UMW8 372 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms