RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 NR5A2O00482 541 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 KLF11O14901 512 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 ASS1P00966 412 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 PROCP04070 461 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 NR3C2P08235 984 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 METTL21CQ5VZV1 264 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 CPNE9Q8IYJ1 553 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 FNIP1Q8TF40 1166 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 STARD8Q92502 1023 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 TEKT5Q96M29 485 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 RPRD1AQ96P16 312 aaPredicted RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 CGREF1Q99674 301 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 EMILIN2Q9BXX0 1053 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 DPY30Q9C005 99 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 PTGES3LE9PB15 166 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 SERPINA6P08185 405 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 BST1Q10588 318 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 PGS1Q32NB8 556 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 ERFEQ4G0M1 354 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 IER5Q5VY09 327 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 SEPHS2Q99611 448 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 JPH1Q9HDC5 661 aaPredicted RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 N6AMT1Q9Y5N5 214 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 URB1O60287 2271 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 SDR42E2A6NKP2 422 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 UBDO15205 165 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 GLRA2P23416 452 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 CAMK1Q14012 370 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 NEDD8Q15843 81 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF677Q86XU0 584 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 FEZF2Q8TBJ5 459 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 GRIN3AQ8TCU5 1115 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 DRG1Q9Y295 367 aaKnown RBP11.64□□□□□ -0.55
U2AF1-209ENST00000475639 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
U2AF1-209ENST00000475639 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TMX2-CTNND1H3BSU7 103 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 HAT1O14929 419 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 INPP4BO15327 924 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GRK4P32298 578 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ALDH3B2P48448 385 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GMFBP60983 142 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GAD2Q05329 585 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 VPS72Q15906 364 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 C10orf120Q5SQS8 335 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 NANOGP8Q6NSW7 305 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SLC47A2Q86VL8 602 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 FAM71DQ8N9W8 422 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ACTRT2Q8TDY3 377 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TFB1MQ8WVM0 346 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 FAM49BQ9NUQ9 324 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF112Q9UJU3 913 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ARFGEF1Q9Y6D6 1849 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 NFASCO94856 1347 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 F9P00740 461 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 NCAM1P13591 858 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF12P17014 697 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CCNA2P20248 432 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 MSH3P20585 1137 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 S100GP29377 79 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 KPNA1P52294 538 aaPredicted RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SKP1P63208 163 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 FMO1Q01740 532 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GRAPQ13588 217 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 DENND5BQ6ZUT9 1274 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SH2D5Q6ZV89 423 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CCDC36Q8IYA8 594 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TSPAN14Q8NG11 270 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 GRAPLQ8TC17 118 aaPredicted RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ERLEC1Q96DZ1 483 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 C7orf26Q96N11 449 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 C20orf27Q9GZN8 174 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 VTI1BQ9UEU0 232 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 DNAJC16Q9Y2G8 782 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 NOX1Q9Y5S8 564 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 CDH3P22223 829 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SV2CQ496J9 727 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ARHGAP15Q53QZ3 475 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 MZT2AQ6P582 158 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF605Q86T29 641 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 TICAM1Q8IUC6 712 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 WDR83Q9BRX9 315 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 UGT2B28Q9BY64 529 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 IGSF9Q9P2J2 1179 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 FETUBQ9UGM5 382 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 EBF1Q9UH73 591 aa11.63□□□□□ -0.55
U2AF1-209ENST00000475639 RUVBL2Q9Y230 463 aaKnown RBP11.63□□□□□ -0.55
U2AF1-209ENST00000475639 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms