RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TBCCQ15814 346 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 MS4A13Q5J8X5 152 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 RANBP10Q6VN20 620 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 MON1AQ86VX9 555 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ZNF683Q8IZ20 524 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 FSTL5Q8N475 847 aaPredicted RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 EFCAB3Q8N7B9 438 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 NXNL1Q96CM4 212 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 PABPC5Q96DU9 382 aaKnown RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 NAF1Q96HR8 494 aaKnown RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 STN1Q9H668 368 aaKnown RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 WDR55Q9H6Y2 383 aaPredicted RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 NMRK1Q9NWW6 199 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 TLR6Q9Y2C9 796 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 FRMPD3Q5JV73 1810 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 CD86P42081 329 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ABL2P42684 1182 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 NAGLUP54802 743 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 CFAP157Q5JU67 520 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 EPGNQ6UW88 154 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ZYG11AQ6WRX3 759 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 CNTN4Q8IWV2 1026 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ARHGAP24Q8N264 748 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 STMN2Q93045 179 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 SGF29Q96ES7 293 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 MYEOVQ96EZ4 313 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 ELMO2Q96JJ3 720 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 NDNQ99608 321 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 CRISPLD1Q9H336 500 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 CYP4F11Q9HBI6 524 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 TREX1Q9NSU2 369 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 XPR1Q9UBH6 696 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
UBXN11-214ENST00000475591 LRRC42Q9Y546 428 aa14.26□□□□□ -0.13
UBXN11-214ENST00000475591 A0A088AWK7 358 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 AP3B1O00203 1094 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 TADA2AO75478 443 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 KLHL2O95198 593 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 ATP5BP06576 529 aaKnown RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 PBX3P40426 434 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 TAS2R39P59534 338 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 DSC2Q02487 901 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 DNAL1Q4LDG9 190 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 RBM20Q5T481 1227 aaKnown RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 SNX30Q5VWJ9 437 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 TIGD7Q6NT04 549 aaPredicted RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 CNSTQ6PJW8 725 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 KDELC1Q6UW63 502 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 DCP1BQ8IZD4 617 aaKnown RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 PSMG2Q969U7 264 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 ENTPD7Q9NQZ7 604 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 CDY1Q9Y6F8 540 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 ARHGEF37A1IGU5 675 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 PIGNO95427 931 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 JUNP05412 331 aaKnown RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 ETFBP38117 255 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 COPAP53621 1224 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 RAB10P61026 200 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 SLC12A1Q13621 1099 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 CTXN3Q4LDR2 81 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 ARL13AQ5H913 290 aaPredicted RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 TSTD2Q5T7W7 516 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 FAM171A1Q5VUB5 890 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 LRRC8EQ6NSJ5 796 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 POTEHQ6S545 545 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 CFAP61Q8NHU2 1237 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 GPR78Q96P69 363 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 GPR62Q9BZJ7 368 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 CXorf56Q9H5V9 222 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 PRDM5Q9NQX1 630 aaPredicted RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 NSMCE4AQ9NXX6 385 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 STOML1Q9UBI4 398 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 SORCS3Q9UPU3 1222 aa14.25□□□□□ -0.13
UBXN11-214ENST00000475591 MTF2Q9Y483 593 aaPredicted RBP14.25□□□□□ -0.13
UBXN11-214ENST00000475591 TMEM114B3SHH9 223 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 DLX3O60479 287 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 PDE5AO76074 875 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 EOMESO95936 686 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 DNAJB2P25686 324 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 EPHA3P29320 983 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 HTR7P34969 479 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 LIPMQ5VYY2 423 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 FAM219BQ5XKK7 198 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
UBXN11-214ENST00000475591 FRMD7Q6ZUT3 714 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 RNF180Q86T96 592 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 LDB1Q86U70 411 aaPredicted RBP14.24□□□□□ -0.13
UBXN11-214ENST00000475591 STYXQ8WUJ0 223 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 ZDHHC2Q9UIJ5 367 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 ANKRD6Q9Y2G4 727 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 ACOT9Q9Y305 439 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 PCDHB5Q9Y5E4 795 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 VWA8A3KMH1 1905 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 NEMP2A6NFY4 417 aa14.24□□□□□ -0.13
UBXN11-214ENST00000475591 TARM1B6A8C7 271 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms