RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MCM3P25205 808 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 NNMTP40261 264 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 ATXN3P54252 364 aaPredicted RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 HDAC4P56524 1084 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 BNC1Q01954 994 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 NRG1Q02297 640 aaPredicted RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 GRIK2Q13002 908 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 SLC14A1Q13336 389 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 KRT81Q14533 505 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 ELAVL3Q14576 367 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 UAP1L1Q3KQV9 507 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 RNF219Q5W0B1 726 aaPredicted RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 SETD3Q86TU7 594 aaPredicted RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 MMAAQ8IVH4 418 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 STK40Q8N2I9 435 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 ZCCHC9Q8N567 271 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 BIRC7Q96CA5 298 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 MAK16Q9BXY0 300 aaKnown RBP15.94■□□□□ 0.14
CPSF3-203ENST00000475482 OSBPL8Q9BZF1 889 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 HS3ST2Q9Y278 367 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 DOCK9Q9BZ29 2069 aa15.94■□□□□ 0.14
CPSF3-203ENST00000475482 PLXNA2O75051 1894 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 E9PAM4 449 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 MID1O15344 667 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 OPHN1O60890 802 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 IGHV4-34P06331 123 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 RARAP10276 462 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 VAV1P15498 845 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 C5AR1P21730 350 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 KDELR1P24390 212 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 IL1R2P27930 398 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 SLC8A1P32418 973 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF135P52742 658 aaPredicted RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 C2orf54Q08AI8 447 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 SFSWAPQ12872 951 aaKnown RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 RAB6CQ53S08 254 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 MANEALQ5VSG8 457 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 C8orf74Q6P047 294 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 SPOCD1Q6ZMY3 1216 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 MAATS1Q7Z4T9 603 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 FAM131BQ86XD5 332 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 AADATQ8N5Z0 425 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 TTC13Q8NBP0 860 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 OR2I1PQ8NGU4 316 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 HSPH1Q92598 858 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 RNF25Q96BH1 459 aaPredicted RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 GTPBP2Q9BX10 602 aaKnown RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 RAB6CQ9H0N0 254 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 NEUROG2Q9H2A3 272 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 PPARGC1AQ9UBK2 798 aaKnown RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 FEZ2Q9UHY8 353 aaPredicted RBP15.93■□□□□ 0.14
CPSF3-203ENST00000475482 VPS28Q9UK41 221 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 WASF3Q9UPY6 502 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 NCKAP1Q9Y2A7 1128 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 TMEM131Q92545 1883 aa15.93■□□□□ 0.14
CPSF3-203ENST00000475482 A0A1W2PP55 124 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 DYNC1I1O14576 645 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 ADH1BP00325 375 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 ZNF883P0CG24 379 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 TCF4P15884 667 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 GOT1P17174 413 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 CD27P26842 260 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 CHRNA3P32297 505 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 ADRA1BP35368 520 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 DRD3P35462 400 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 CDH6P55285 790 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 TFDP2Q14188 446 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 DLG2Q15700 870 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 SMTNL2Q2TAL5 461 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 ATP13A4Q4VNC1 1196 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 EFHC2Q5JST6 749 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 KIAA0895LQ68EN5 471 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 LRRC31Q6UY01 552 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 HDDC3Q8N4P3 179 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 DCAF4L2Q8NA75 395 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 DEFB124Q8NES8 71 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 NTAN1Q96AB6 310 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 FRMD8P1Q9BZ68 369 aaPredicted RBP15.92■□□□□ 0.14
CPSF3-203ENST00000475482 MIR1-1HGQ9H1L0 117 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 SMARCAL1Q9NZC9 954 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 MPP6Q9NZW5 540 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 RCOR3Q9P2K3 495 aaPredicted RBP15.92■□□□□ 0.14
CPSF3-203ENST00000475482 PPM1HQ9ULR3 514 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 AP4E1Q9UPM8 1137 aa15.92■□□□□ 0.14
CPSF3-203ENST00000475482 TP53BP1Q12888 1972 aaPredicted RBP15.91■□□□□ 0.14
CPSF3-203ENST00000475482 A0A0D9SEW6 157 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 ILVBLA1L0T0 632 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 MCF2LO15068 1137 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 ALOX15BO15296 676 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 PHF2O75151 1096 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 MT-CO1P00395 513 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 SRCP12931 536 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 CDKN2BP42772 138 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 GRIA4P48058 902 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 NUMBP49757 651 aa15.91■□□□□ 0.14
CPSF3-203ENST00000475482 AFF3P51826 1226 aaKnown RBP15.91■□□□□ 0.14
CPSF3-203ENST00000475482 ERCC6LQ2NKX8 1250 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms