RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 UNC5BQ8IZJ1 945 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 C4orf33Q8N1A6 199 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 ARRDC2Q8TBH0 407 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 MGARPQ8TDB4 240 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 IFT43Q96FT9 208 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 MGME1Q9BQP7 344 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 PBX4Q9BYU1 374 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 NKX2-4Q9H2Z4 354 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 ZMYM5Q9UJ78 669 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 SMG5Q9UPR3 1016 aaKnown RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 ACTL7AQ9Y615 435 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 NOTCH4Q99466 2003 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 SNRPAP09012 282 aaKnown RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 KRT4P19013 534 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 MZF1P28698 734 aaPredicted RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 CSKP41240 450 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 PTCD2Q8WV60 388 aaKnown RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 MFSD3Q96ES6 412 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 FCRL3Q96P31 734 aaPredicted RBP20.06■□□□□ 0.8
SSR1-204ENST00000474597 PSKH2Q96QS6 385 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 FEM1AQ9BSK4 669 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 KIFC1Q9BW19 673 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 LMAN2LQ9H0V9 348 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 KIF9Q9HAQ2 790 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 CCL26Q9Y258 94 aa20.06■□□□□ 0.8
SSR1-204ENST00000474597 FAM47DPA6NHR8 397 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 MUSKO15146 869 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 SPAG7O75391 227 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 POU2F2P09086 479 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 ERVK-10P10266 1014 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 FRG1Q14331 258 aaKnown RBP20.05■□□□□ 0.8
SSR1-204ENST00000474597 PKN3Q6P5Z2 889 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 TAX1BP1Q86VP1 789 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 SMG7Q92540 1137 aaKnown RBP20.05■□□□□ 0.8
SSR1-204ENST00000474597 USP13Q92995 863 aaPredicted RBP20.05■□□□□ 0.8
SSR1-204ENST00000474597 ALKBH8Q96BT7 664 aaKnown RBP20.05■□□□□ 0.8
SSR1-204ENST00000474597 MTBPQ96DY7 904 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 ABHD8Q96I13 439 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 MYLKQ15746 1914 aa20.05■□□□□ 0.8
SSR1-204ENST00000474597 ZCWPW2A0A1B0GU75 182 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 TRIM49D1C9J1S8 452 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 PRPF4O43172 522 aaKnown RBP eCLIP20.04■□□□□ 0.83e-10■□□□□ 9.3
SSR1-204ENST00000474597 SNAP91O60641 907 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 UGT1A9O60656 530 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 CNTFP26441 200 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 NMBRP28336 390 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 CHRNA4P43681 627 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 NRIP1P48552 1158 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ARF5P84085 180 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 SEPT6Q14141 434 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 SLC1A5Q15758 541 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 RAB30Q15771 203 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 PRSS36Q5K4E3 855 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ALG1LQ6GMV1 187 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ZNF771Q7L3S4 317 aaPredicted RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 MZB1Q8WU39 189 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 TADA1Q96BN2 335 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 UGT1A7Q9HAW7 530 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 UGT1A10Q9HAW8 530 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 UGT1A8Q9HAW9 530 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ARNT2Q9HBZ2 717 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 SCUBE2Q9NQ36 999 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 C20orf96Q9NUD7 363 aaPredicted RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 PLK2Q9NYY3 685 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 IL1RAPL1Q9NZN1 696 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 MRPS23Q9Y3D9 190 aaKnown RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 TCAF1Q9Y4C2 921 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ATG2AQ2TAZ0 1938 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 CCDC78A2IDD5 438 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 PAMP19021 973 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ADRA1DP25100 572 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 SERPINH1P50454 418 aaKnown RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 SCNN1BP51168 640 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 LRRC14Q15048 493 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 SMAD1Q15797 465 aaKnown RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 KCNMB4Q86W47 210 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 CNPY4Q8N129 248 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 DCAF4L2Q8NA75 395 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 WFDC5Q8TCV5 224 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 GDPD5Q8WTR4 605 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 ING5Q8WYH8 240 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 C2orf49Q9BVC5 232 aaPredicted RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 SLC28A3Q9HAS3 691 aa20.04■□□□□ 0.8
SSR1-204ENST00000474597 MRM3Q9HC36 420 aaKnown RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 SSU72Q9NP77 194 aaKnown RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 KIAA1522Q9P206 1035 aaPredicted RBP20.04■□□□□ 0.8
SSR1-204ENST00000474597 CA4P22748 312 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 CES1P23141 567 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 CYTH1Q15438 398 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 SEPT7Q16181 437 aaKnown RBP20.03■□□□□ 0.8
SSR1-204ENST00000474597 DUSP6Q16828 381 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 ARMC3Q5W041 872 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 LINGO4Q6UY18 593 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 ZNF707Q96C28 371 aaPredicted RBP20.03■□□□□ 0.8
SSR1-204ENST00000474597 SGSM3Q96HU1 749 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 FEM1CQ96JP0 617 aa20.03■□□□□ 0.8
SSR1-204ENST00000474597 EPN3Q9H201 632 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms